Gene : Thecc1EG034357 T. cacao v1.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  550
Name:  ? Thecc1EG034357 Secondary Identifier:  ? PAC:27458433
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034357 0.5kb upstream 0.5kb upstream 4415 true scaffold_8: 2585771-2590185 Theobroma cacao
Thecc1EG034357 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2585771-2586270 Theobroma cacao
Thecc1EG034357 0.5kb downstream 0.5kb downstream 4415 true scaffold_8: 2586271-2590685 Theobroma cacao
Thecc1EG034357 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2590186-2590685 Theobroma cacao
Thecc1EG034357 1.0kb upstream 1.0kb upstream 4915 true scaffold_8: 2585271-2590185 Theobroma cacao
Thecc1EG034357 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2585271-2586270 Theobroma cacao
Thecc1EG034357 1.0kb downstream 1.0kb downstream 4915 true scaffold_8: 2586271-2591185 Theobroma cacao
Thecc1EG034357 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2590186-2591185 Theobroma cacao
Thecc1EG034357 2.0kb upstream 2.0kb upstream 5915 true scaffold_8: 2584271-2590185 Theobroma cacao
Thecc1EG034357 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2584271-2586270 Theobroma cacao
Thecc1EG034357 2.0kb downstream 2.0kb downstream 5915 true scaffold_8: 2586271-2592185 Theobroma cacao
Thecc1EG034357 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2590186-2592185 Theobroma cacao
Thecc1EG034357 5.0kb upstream 5.0kb upstream 8915 true scaffold_8: 2581271-2590185 Theobroma cacao
Thecc1EG034357 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2581271-2586270 Theobroma cacao
Thecc1EG034357 5.0kb downstream 5.0kb downstream 8915 true scaffold_8: 2586271-2595185 Theobroma cacao
Thecc1EG034357 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2590186-2595185 Theobroma cacao
Thecc1EG034357 10.0kb upstream 10.0kb upstream 13915 true scaffold_8: 2576271-2590185 Theobroma cacao
Thecc1EG034357 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2576271-2586270 Theobroma cacao
Thecc1EG034357 10.0kb downstream 10.0kb downstream 13915 true scaffold_8: 2586271-2600185 Theobroma cacao
Thecc1EG034357 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2590186-2600185 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838553 5264 Brassicales-Malvales View MSA
124337875 5266 SBM View MSA
124238414 5268 Malvidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain