Gene : Thecc1EG034331 T. cacao v1.1
Defline:  (1 of 1) K07583 - tRNA pseudouridine synthase 10 [EC:5.4.99.-] (PUS10) Genomic Order:  525
Name:  ? Thecc1EG034331 Secondary Identifier:  ? PAC:27458326
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034331 0.5kb upstream 0.5kb upstream 5025 true scaffold_8: 2483602-2488626 Theobroma cacao
Thecc1EG034331 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2488127-2488626 Theobroma cacao
Thecc1EG034331 0.5kb downstream 0.5kb downstream 5025 true scaffold_8: 2483102-2488126 Theobroma cacao
Thecc1EG034331 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2483102-2483601 Theobroma cacao
Thecc1EG034331 1.0kb upstream 1.0kb upstream 5525 true scaffold_8: 2483602-2489126 Theobroma cacao
Thecc1EG034331 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2488127-2489126 Theobroma cacao
Thecc1EG034331 1.0kb downstream 1.0kb downstream 5525 true scaffold_8: 2482602-2488126 Theobroma cacao
Thecc1EG034331 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2482602-2483601 Theobroma cacao
Thecc1EG034331 2.0kb upstream 2.0kb upstream 6525 true scaffold_8: 2483602-2490126 Theobroma cacao
Thecc1EG034331 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2488127-2490126 Theobroma cacao
Thecc1EG034331 2.0kb downstream 2.0kb downstream 6525 true scaffold_8: 2481602-2488126 Theobroma cacao
Thecc1EG034331 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2481602-2483601 Theobroma cacao
Thecc1EG034331 5.0kb upstream 5.0kb upstream 9525 true scaffold_8: 2483602-2493126 Theobroma cacao
Thecc1EG034331 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2488127-2493126 Theobroma cacao
Thecc1EG034331 5.0kb downstream 5.0kb downstream 9525 true scaffold_8: 2478602-2488126 Theobroma cacao
Thecc1EG034331 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2478602-2483601 Theobroma cacao
Thecc1EG034331 10.0kb upstream 10.0kb upstream 14525 true scaffold_8: 2483602-2498126 Theobroma cacao
Thecc1EG034331 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2488127-2498126 Theobroma cacao
Thecc1EG034331 10.0kb downstream 10.0kb downstream 14525 true scaffold_8: 2473602-2488126 Theobroma cacao
Thecc1EG034331 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2473602-2483601 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832201 5264 Brassicales-Malvales View MSA
124343553 5266 SBM View MSA
124251289 5268 Malvidae View MSA
124067203 5270 Rosid View MSA
123736775 5271 Pentapetalae View MSA
122787797 5272 Eudicot View MSA
122042917 5273 Angiosperm View MSA
121345830 5274 Embryophyte View MSA
123425178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain