Gene : Thecc1EG034309 T. cacao v1.1
Defline:  (1 of 5) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  507
Name:  ? Thecc1EG034309 Secondary Identifier:  ? PAC:27456820
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao POLYAMINSYN3-PWY Theobroma cacao pathologic  
Tcacao PWY-46 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034309 0.5kb upstream 0.5kb upstream 2171 true scaffold_8: 2387505-2389675 Theobroma cacao
Thecc1EG034309 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2389176-2389675 Theobroma cacao
Thecc1EG034309 0.5kb downstream 0.5kb downstream 2171 true scaffold_8: 2387005-2389175 Theobroma cacao
Thecc1EG034309 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2387005-2387504 Theobroma cacao
Thecc1EG034309 1.0kb upstream 1.0kb upstream 2671 true scaffold_8: 2387505-2390175 Theobroma cacao
Thecc1EG034309 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2389176-2390175 Theobroma cacao
Thecc1EG034309 1.0kb downstream 1.0kb downstream 2671 true scaffold_8: 2386505-2389175 Theobroma cacao
Thecc1EG034309 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2386505-2387504 Theobroma cacao
Thecc1EG034309 2.0kb upstream 2.0kb upstream 3671 true scaffold_8: 2387505-2391175 Theobroma cacao
Thecc1EG034309 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2389176-2391175 Theobroma cacao
Thecc1EG034309 2.0kb downstream 2.0kb downstream 3671 true scaffold_8: 2385505-2389175 Theobroma cacao
Thecc1EG034309 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2385505-2387504 Theobroma cacao
Thecc1EG034309 5.0kb upstream 5.0kb upstream 6671 true scaffold_8: 2387505-2394175 Theobroma cacao
Thecc1EG034309 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2389176-2394175 Theobroma cacao
Thecc1EG034309 5.0kb downstream 5.0kb downstream 6671 true scaffold_8: 2382505-2389175 Theobroma cacao
Thecc1EG034309 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2382505-2387504 Theobroma cacao
Thecc1EG034309 10.0kb upstream 10.0kb upstream 11671 true scaffold_8: 2387505-2399175 Theobroma cacao
Thecc1EG034309 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2389176-2399175 Theobroma cacao
Thecc1EG034309 10.0kb downstream 10.0kb downstream 11671 true scaffold_8: 2377505-2389175 Theobroma cacao
Thecc1EG034309 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2377505-2387504 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827244 5264 Brassicales-Malvales View MSA
124350823 5266 SBM View MSA
124250091 5268 Malvidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain