Gene : Thecc1EG034315 T. cacao v1.1
Defline:  (1 of 13) PF00924 - Mechanosensitive ion channel (MS_channel) Genomic Order:  511
Name:  ? Thecc1EG034315 Secondary Identifier:  ? PAC:27458364
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034315 0.5kb upstream 0.5kb upstream 4705 true scaffold_8: 2418489-2423193 Theobroma cacao
Thecc1EG034315 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2418489-2418988 Theobroma cacao
Thecc1EG034315 0.5kb downstream 0.5kb downstream 4705 true scaffold_8: 2418989-2423693 Theobroma cacao
Thecc1EG034315 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2423194-2423693 Theobroma cacao
Thecc1EG034315 1.0kb upstream 1.0kb upstream 5205 true scaffold_8: 2417989-2423193 Theobroma cacao
Thecc1EG034315 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2417989-2418988 Theobroma cacao
Thecc1EG034315 1.0kb downstream 1.0kb downstream 5205 true scaffold_8: 2418989-2424193 Theobroma cacao
Thecc1EG034315 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2423194-2424193 Theobroma cacao
Thecc1EG034315 2.0kb upstream 2.0kb upstream 6205 true scaffold_8: 2416989-2423193 Theobroma cacao
Thecc1EG034315 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2416989-2418988 Theobroma cacao
Thecc1EG034315 2.0kb downstream 2.0kb downstream 6205 true scaffold_8: 2418989-2425193 Theobroma cacao
Thecc1EG034315 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2423194-2425193 Theobroma cacao
Thecc1EG034315 5.0kb upstream 5.0kb upstream 9205 true scaffold_8: 2413989-2423193 Theobroma cacao
Thecc1EG034315 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2413989-2418988 Theobroma cacao
Thecc1EG034315 5.0kb downstream 5.0kb downstream 9205 true scaffold_8: 2418989-2428193 Theobroma cacao
Thecc1EG034315 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2423194-2428193 Theobroma cacao
Thecc1EG034315 10.0kb upstream 10.0kb upstream 14205 true scaffold_8: 2408989-2423193 Theobroma cacao
Thecc1EG034315 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2408989-2418988 Theobroma cacao
Thecc1EG034315 10.0kb downstream 10.0kb downstream 14205 true scaffold_8: 2418989-2433193 Theobroma cacao
Thecc1EG034315 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2423194-2433193 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824748 5264 Brassicales-Malvales View MSA
124320314 5266 SBM View MSA
124248253 5268 Malvidae View MSA
124038048 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain