Gene : Thecc1EG034292 T. cacao v1.1
Defline:  (1 of 1) K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Genomic Order:  491
Name:  ? Thecc1EG034292 Secondary Identifier:  ? PAC:27459243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034292 0.5kb upstream 0.5kb upstream 3188 true scaffold_8: 2320879-2324066 Theobroma cacao
Thecc1EG034292 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2320879-2321378 Theobroma cacao
Thecc1EG034292 0.5kb downstream 0.5kb downstream 3188 true scaffold_8: 2321379-2324566 Theobroma cacao
Thecc1EG034292 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2324067-2324566 Theobroma cacao
Thecc1EG034292 1.0kb upstream 1.0kb upstream 3688 true scaffold_8: 2320379-2324066 Theobroma cacao
Thecc1EG034292 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2320379-2321378 Theobroma cacao
Thecc1EG034292 1.0kb downstream 1.0kb downstream 3688 true scaffold_8: 2321379-2325066 Theobroma cacao
Thecc1EG034292 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2324067-2325066 Theobroma cacao
Thecc1EG034292 2.0kb upstream 2.0kb upstream 4688 true scaffold_8: 2319379-2324066 Theobroma cacao
Thecc1EG034292 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2319379-2321378 Theobroma cacao
Thecc1EG034292 2.0kb downstream 2.0kb downstream 4688 true scaffold_8: 2321379-2326066 Theobroma cacao
Thecc1EG034292 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2324067-2326066 Theobroma cacao
Thecc1EG034292 5.0kb upstream 5.0kb upstream 7688 true scaffold_8: 2316379-2324066 Theobroma cacao
Thecc1EG034292 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2316379-2321378 Theobroma cacao
Thecc1EG034292 5.0kb downstream 5.0kb downstream 7688 true scaffold_8: 2321379-2329066 Theobroma cacao
Thecc1EG034292 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2324067-2329066 Theobroma cacao
Thecc1EG034292 10.0kb upstream 10.0kb upstream 12688 true scaffold_8: 2311379-2324066 Theobroma cacao
Thecc1EG034292 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2311379-2321378 Theobroma cacao
Thecc1EG034292 10.0kb downstream 10.0kb downstream 12688 true scaffold_8: 2321379-2334066 Theobroma cacao
Thecc1EG034292 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2324067-2334066 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827875 5264 Brassicales-Malvales View MSA
124340786 5266 SBM View MSA
124242022 5268 Malvidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain