Gene : Thecc1EG034487 T. cacao v1.1

Defline:  (1 of 1) PTHR23176//PTHR23176:SF42 - RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN // RHO GTPASE-ACTIVATING PROTEIN REN1 Genomic Order:  667
Name:  ? Thecc1EG034487 Secondary Identifier:  ? PAC:27457253

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034487 0.5kb upstream 0.5kb upstream 16160 true scaffold_8: 3212672-3228831 Theobroma cacao
Thecc1EG034487 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3212672-3213171 Theobroma cacao
Thecc1EG034487 0.5kb downstream 0.5kb downstream 16160 true scaffold_8: 3213172-3229331 Theobroma cacao
Thecc1EG034487 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3228832-3229331 Theobroma cacao
Thecc1EG034487 1.0kb upstream 1.0kb upstream 16660 true scaffold_8: 3212172-3228831 Theobroma cacao
Thecc1EG034487 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3212172-3213171 Theobroma cacao
Thecc1EG034487 1.0kb downstream 1.0kb downstream 16660 true scaffold_8: 3213172-3229831 Theobroma cacao
Thecc1EG034487 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3228832-3229831 Theobroma cacao
Thecc1EG034487 2.0kb upstream 2.0kb upstream 17660 true scaffold_8: 3211172-3228831 Theobroma cacao
Thecc1EG034487 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3211172-3213171 Theobroma cacao
Thecc1EG034487 2.0kb downstream 2.0kb downstream 17660 true scaffold_8: 3213172-3230831 Theobroma cacao
Thecc1EG034487 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3228832-3230831 Theobroma cacao
Thecc1EG034487 5.0kb upstream 5.0kb upstream 20660 true scaffold_8: 3208172-3228831 Theobroma cacao
Thecc1EG034487 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3208172-3213171 Theobroma cacao
Thecc1EG034487 5.0kb downstream 5.0kb downstream 20660 true scaffold_8: 3213172-3233831 Theobroma cacao
Thecc1EG034487 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3228832-3233831 Theobroma cacao
Thecc1EG034487 10.0kb upstream 10.0kb upstream 25660 true scaffold_8: 3203172-3228831 Theobroma cacao
Thecc1EG034487 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3203172-3213171 Theobroma cacao
Thecc1EG034487 10.0kb downstream 10.0kb downstream 25660 true scaffold_8: 3213172-3238831 Theobroma cacao
Thecc1EG034487 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3228832-3238831 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835300 5264 Brassicales-Malvales View MSA
124343934 5266 SBM View MSA
124252587 5268 Malvidae View MSA
124067310 5270 Rosid View MSA
123749156 5271 Pentapetalae View MSA
122794752 5272 Eudicot View MSA
122042223 5273 Angiosperm View MSA
121347338 5274 Embryophyte View MSA
123380531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain