Gene : Thecc1EG034478 T. cacao v1.1
Defline:  Unknown Genomic Order:  658
Name:  ? Thecc1EG034478 Secondary Identifier:  ? PAC:27456410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034478 0.5kb upstream 0.5kb upstream 1958 true scaffold_8: 3158176-3160133 Theobroma cacao
Thecc1EG034478 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3158176-3158675 Theobroma cacao
Thecc1EG034478 0.5kb downstream 0.5kb downstream 1958 true scaffold_8: 3158676-3160633 Theobroma cacao
Thecc1EG034478 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3160134-3160633 Theobroma cacao
Thecc1EG034478 1.0kb upstream 1.0kb upstream 2458 true scaffold_8: 3157676-3160133 Theobroma cacao
Thecc1EG034478 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3157676-3158675 Theobroma cacao
Thecc1EG034478 1.0kb downstream 1.0kb downstream 2458 true scaffold_8: 3158676-3161133 Theobroma cacao
Thecc1EG034478 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3160134-3161133 Theobroma cacao
Thecc1EG034478 2.0kb upstream 2.0kb upstream 3458 true scaffold_8: 3156676-3160133 Theobroma cacao
Thecc1EG034478 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3156676-3158675 Theobroma cacao
Thecc1EG034478 2.0kb downstream 2.0kb downstream 3458 true scaffold_8: 3158676-3162133 Theobroma cacao
Thecc1EG034478 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3160134-3162133 Theobroma cacao
Thecc1EG034478 5.0kb upstream 5.0kb upstream 6458 true scaffold_8: 3153676-3160133 Theobroma cacao
Thecc1EG034478 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3153676-3158675 Theobroma cacao
Thecc1EG034478 5.0kb downstream 5.0kb downstream 6458 true scaffold_8: 3158676-3165133 Theobroma cacao
Thecc1EG034478 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3160134-3165133 Theobroma cacao
Thecc1EG034478 10.0kb upstream 10.0kb upstream 11458 true scaffold_8: 3148676-3160133 Theobroma cacao
Thecc1EG034478 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3148676-3158675 Theobroma cacao
Thecc1EG034478 10.0kb downstream 10.0kb downstream 11458 true scaffold_8: 3158676-3170133 Theobroma cacao
Thecc1EG034478 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3160134-3170133 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121523587 5273 Angiosperm Singleton cluster - no MSA
123821972 5264 Brassicales-Malvales Singleton cluster - no MSA
124318130 5266 SBM Singleton cluster - no MSA
124166802 5268 Malvidae Singleton cluster - no MSA
123890360 5270 Rosid Singleton cluster - no MSA
123472694 5271 Pentapetalae Singleton cluster - no MSA
122507979 5272 Eudicot Singleton cluster - no MSA
120796377 5274 Embryophyte Singleton cluster - no MSA
122837965 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain