Gene : Thecc1EG034455 T. cacao v1.1
Defline:  (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  637
Name:  ? Thecc1EG034455 Secondary Identifier:  ? PAC:27456734
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6124 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034455 0.5kb upstream 0.5kb upstream 5077 true scaffold_8: 3048419-3053495 Theobroma cacao
Thecc1EG034455 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3052996-3053495 Theobroma cacao
Thecc1EG034455 0.5kb downstream 0.5kb downstream 5077 true scaffold_8: 3047919-3052995 Theobroma cacao
Thecc1EG034455 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3047919-3048418 Theobroma cacao
Thecc1EG034455 1.0kb upstream 1.0kb upstream 5577 true scaffold_8: 3048419-3053995 Theobroma cacao
Thecc1EG034455 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3052996-3053995 Theobroma cacao
Thecc1EG034455 1.0kb downstream 1.0kb downstream 5577 true scaffold_8: 3047419-3052995 Theobroma cacao
Thecc1EG034455 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3047419-3048418 Theobroma cacao
Thecc1EG034455 2.0kb upstream 2.0kb upstream 6577 true scaffold_8: 3048419-3054995 Theobroma cacao
Thecc1EG034455 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3052996-3054995 Theobroma cacao
Thecc1EG034455 2.0kb downstream 2.0kb downstream 6577 true scaffold_8: 3046419-3052995 Theobroma cacao
Thecc1EG034455 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3046419-3048418 Theobroma cacao
Thecc1EG034455 5.0kb upstream 5.0kb upstream 9577 true scaffold_8: 3048419-3057995 Theobroma cacao
Thecc1EG034455 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3052996-3057995 Theobroma cacao
Thecc1EG034455 5.0kb downstream 5.0kb downstream 9577 true scaffold_8: 3043419-3052995 Theobroma cacao
Thecc1EG034455 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3043419-3048418 Theobroma cacao
Thecc1EG034455 10.0kb upstream 10.0kb upstream 14577 true scaffold_8: 3048419-3062995 Theobroma cacao
Thecc1EG034455 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3052996-3062995 Theobroma cacao
Thecc1EG034455 10.0kb downstream 10.0kb downstream 14577 true scaffold_8: 3038419-3052995 Theobroma cacao
Thecc1EG034455 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3038419-3048418 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829780 5264 Brassicales-Malvales View MSA
124339930 5266 SBM View MSA
124242739 5268 Malvidae View MSA
124065715 5270 Rosid View MSA
123739359 5271 Pentapetalae View MSA
122791298 5272 Eudicot View MSA
122044442 5273 Angiosperm View MSA
121346335 5274 Embryophyte View MSA
123424061 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain