Gene : Thecc1EG034400 T. cacao v1.1

Defline:  (1 of 5) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  589
Name:  ? Thecc1EG034400 Secondary Identifier:  ? PAC:27457448

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034400 0.5kb upstream 0.5kb upstream 3113 true scaffold_8: 2794763-2797875 Theobroma cacao
Thecc1EG034400 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2794763-2795262 Theobroma cacao
Thecc1EG034400 0.5kb downstream 0.5kb downstream 3113 true scaffold_8: 2795263-2798375 Theobroma cacao
Thecc1EG034400 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2797876-2798375 Theobroma cacao
Thecc1EG034400 1.0kb upstream 1.0kb upstream 3613 true scaffold_8: 2794263-2797875 Theobroma cacao
Thecc1EG034400 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2794263-2795262 Theobroma cacao
Thecc1EG034400 1.0kb downstream 1.0kb downstream 3613 true scaffold_8: 2795263-2798875 Theobroma cacao
Thecc1EG034400 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2797876-2798875 Theobroma cacao
Thecc1EG034400 2.0kb upstream 2.0kb upstream 4613 true scaffold_8: 2793263-2797875 Theobroma cacao
Thecc1EG034400 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2793263-2795262 Theobroma cacao
Thecc1EG034400 2.0kb downstream 2.0kb downstream 4613 true scaffold_8: 2795263-2799875 Theobroma cacao
Thecc1EG034400 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2797876-2799875 Theobroma cacao
Thecc1EG034400 5.0kb upstream 5.0kb upstream 7613 true scaffold_8: 2790263-2797875 Theobroma cacao
Thecc1EG034400 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2790263-2795262 Theobroma cacao
Thecc1EG034400 5.0kb downstream 5.0kb downstream 7613 true scaffold_8: 2795263-2802875 Theobroma cacao
Thecc1EG034400 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2797876-2802875 Theobroma cacao
Thecc1EG034400 10.0kb upstream 10.0kb upstream 12613 true scaffold_8: 2785263-2797875 Theobroma cacao
Thecc1EG034400 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2785263-2795262 Theobroma cacao
Thecc1EG034400 10.0kb downstream 10.0kb downstream 12613 true scaffold_8: 2795263-2807875 Theobroma cacao
Thecc1EG034400 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2797876-2807875 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830952 5264 Brassicales-Malvales View MSA
124337174 5266 SBM View MSA
124241745 5268 Malvidae View MSA
124063187 5270 Rosid View MSA
123747908 5271 Pentapetalae View MSA
122796800 5272 Eudicot View MSA
122042100 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain