Gene : Thecc1EG034582 T. cacao v1.1
Defline:  (1 of 1) K02492 - glutamyl-tRNA reductase (hemA) Genomic Order:  748
Name:  ? Thecc1EG034582 Secondary Identifier:  ? PAC:27456488
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5188 Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034582 0.5kb upstream 0.5kb upstream 4396 true scaffold_8: 3767441-3771836 Theobroma cacao
Thecc1EG034582 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3771337-3771836 Theobroma cacao
Thecc1EG034582 0.5kb downstream 0.5kb downstream 4396 true scaffold_8: 3766941-3771336 Theobroma cacao
Thecc1EG034582 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3766941-3767440 Theobroma cacao
Thecc1EG034582 1.0kb upstream 1.0kb upstream 4896 true scaffold_8: 3767441-3772336 Theobroma cacao
Thecc1EG034582 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3771337-3772336 Theobroma cacao
Thecc1EG034582 1.0kb downstream 1.0kb downstream 4896 true scaffold_8: 3766441-3771336 Theobroma cacao
Thecc1EG034582 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3766441-3767440 Theobroma cacao
Thecc1EG034582 2.0kb upstream 2.0kb upstream 5896 true scaffold_8: 3767441-3773336 Theobroma cacao
Thecc1EG034582 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3771337-3773336 Theobroma cacao
Thecc1EG034582 2.0kb downstream 2.0kb downstream 5896 true scaffold_8: 3765441-3771336 Theobroma cacao
Thecc1EG034582 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3765441-3767440 Theobroma cacao
Thecc1EG034582 5.0kb upstream 5.0kb upstream 8896 true scaffold_8: 3767441-3776336 Theobroma cacao
Thecc1EG034582 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3771337-3776336 Theobroma cacao
Thecc1EG034582 5.0kb downstream 5.0kb downstream 8896 true scaffold_8: 3762441-3771336 Theobroma cacao
Thecc1EG034582 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3762441-3767440 Theobroma cacao
Thecc1EG034582 10.0kb upstream 10.0kb upstream 13896 true scaffold_8: 3767441-3781336 Theobroma cacao
Thecc1EG034582 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3771337-3781336 Theobroma cacao
Thecc1EG034582 10.0kb downstream 10.0kb downstream 13896 true scaffold_8: 3757441-3771336 Theobroma cacao
Thecc1EG034582 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3757441-3767440 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829853 5264 Brassicales-Malvales View MSA
124350051 5266 SBM View MSA
124237055 5268 Malvidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain