Gene : Thecc1EG034549 T. cacao v1.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Genomic Order:  719
Name:  ? Thecc1EG034549 Secondary Identifier:  ? PAC:27457618
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034549 0.5kb upstream 0.5kb upstream 22494 true scaffold_8: 3618607-3641100 Theobroma cacao
Thecc1EG034549 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3618607-3619106 Theobroma cacao
Thecc1EG034549 0.5kb downstream 0.5kb downstream 22494 true scaffold_8: 3619107-3641600 Theobroma cacao
Thecc1EG034549 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3641101-3641600 Theobroma cacao
Thecc1EG034549 1.0kb upstream 1.0kb upstream 22994 true scaffold_8: 3618107-3641100 Theobroma cacao
Thecc1EG034549 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3618107-3619106 Theobroma cacao
Thecc1EG034549 1.0kb downstream 1.0kb downstream 22994 true scaffold_8: 3619107-3642100 Theobroma cacao
Thecc1EG034549 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3641101-3642100 Theobroma cacao
Thecc1EG034549 2.0kb upstream 2.0kb upstream 23994 true scaffold_8: 3617107-3641100 Theobroma cacao
Thecc1EG034549 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3617107-3619106 Theobroma cacao
Thecc1EG034549 2.0kb downstream 2.0kb downstream 23994 true scaffold_8: 3619107-3643100 Theobroma cacao
Thecc1EG034549 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3641101-3643100 Theobroma cacao
Thecc1EG034549 5.0kb upstream 5.0kb upstream 26994 true scaffold_8: 3614107-3641100 Theobroma cacao
Thecc1EG034549 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3614107-3619106 Theobroma cacao
Thecc1EG034549 5.0kb downstream 5.0kb downstream 26994 true scaffold_8: 3619107-3646100 Theobroma cacao
Thecc1EG034549 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3641101-3646100 Theobroma cacao
Thecc1EG034549 10.0kb upstream 10.0kb upstream 31994 true scaffold_8: 3609107-3641100 Theobroma cacao
Thecc1EG034549 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3609107-3619106 Theobroma cacao
Thecc1EG034549 10.0kb downstream 10.0kb downstream 31994 true scaffold_8: 3619107-3651100 Theobroma cacao
Thecc1EG034549 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3641101-3651100 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain