Gene : Thecc1EG034501 T. cacao v1.1
Defline:  (1 of 3) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  679
Name:  ? Thecc1EG034501 Secondary Identifier:  ? PAC:27457964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034501 0.5kb upstream 0.5kb upstream 7567 true scaffold_8: 3300569-3308135 Theobroma cacao
Thecc1EG034501 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3300569-3301068 Theobroma cacao
Thecc1EG034501 0.5kb downstream 0.5kb downstream 7567 true scaffold_8: 3301069-3308635 Theobroma cacao
Thecc1EG034501 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3308136-3308635 Theobroma cacao
Thecc1EG034501 1.0kb upstream 1.0kb upstream 8067 true scaffold_8: 3300069-3308135 Theobroma cacao
Thecc1EG034501 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3300069-3301068 Theobroma cacao
Thecc1EG034501 1.0kb downstream 1.0kb downstream 8067 true scaffold_8: 3301069-3309135 Theobroma cacao
Thecc1EG034501 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3308136-3309135 Theobroma cacao
Thecc1EG034501 2.0kb upstream 2.0kb upstream 9067 true scaffold_8: 3299069-3308135 Theobroma cacao
Thecc1EG034501 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3299069-3301068 Theobroma cacao
Thecc1EG034501 2.0kb downstream 2.0kb downstream 9067 true scaffold_8: 3301069-3310135 Theobroma cacao
Thecc1EG034501 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3308136-3310135 Theobroma cacao
Thecc1EG034501 5.0kb upstream 5.0kb upstream 12067 true scaffold_8: 3296069-3308135 Theobroma cacao
Thecc1EG034501 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3296069-3301068 Theobroma cacao
Thecc1EG034501 5.0kb downstream 5.0kb downstream 12067 true scaffold_8: 3301069-3313135 Theobroma cacao
Thecc1EG034501 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3308136-3313135 Theobroma cacao
Thecc1EG034501 10.0kb upstream 10.0kb upstream 17067 true scaffold_8: 3291069-3308135 Theobroma cacao
Thecc1EG034501 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3291069-3301068 Theobroma cacao
Thecc1EG034501 10.0kb downstream 10.0kb downstream 17067 true scaffold_8: 3301069-3318135 Theobroma cacao
Thecc1EG034501 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3308136-3318135 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834976 5264 Brassicales-Malvales View MSA
124321983 5266 SBM View MSA
124247204 5268 Malvidae View MSA
124071999 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain