Gene : Thecc1EG034705 T. cacao v1.1
Defline:  (1 of 1) 1.14.11.6 - Thymine dioxygenase / Thymine,2-oxoglutarate dioxygenase Genomic Order:  857
Name:  ? Thecc1EG034705 Secondary Identifier:  ? PAC:27459189
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ETHYL-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034705 0.5kb upstream 0.5kb upstream 9220 true scaffold_8: 4405796-4415015 Theobroma cacao
Thecc1EG034705 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4405796-4406295 Theobroma cacao
Thecc1EG034705 0.5kb downstream 0.5kb downstream 9220 true scaffold_8: 4406296-4415515 Theobroma cacao
Thecc1EG034705 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4415016-4415515 Theobroma cacao
Thecc1EG034705 1.0kb upstream 1.0kb upstream 9720 true scaffold_8: 4405296-4415015 Theobroma cacao
Thecc1EG034705 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4405296-4406295 Theobroma cacao
Thecc1EG034705 1.0kb downstream 1.0kb downstream 9720 true scaffold_8: 4406296-4416015 Theobroma cacao
Thecc1EG034705 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4415016-4416015 Theobroma cacao
Thecc1EG034705 2.0kb upstream 2.0kb upstream 10720 true scaffold_8: 4404296-4415015 Theobroma cacao
Thecc1EG034705 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4404296-4406295 Theobroma cacao
Thecc1EG034705 2.0kb downstream 2.0kb downstream 10720 true scaffold_8: 4406296-4417015 Theobroma cacao
Thecc1EG034705 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4415016-4417015 Theobroma cacao
Thecc1EG034705 5.0kb upstream 5.0kb upstream 13720 true scaffold_8: 4401296-4415015 Theobroma cacao
Thecc1EG034705 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4401296-4406295 Theobroma cacao
Thecc1EG034705 5.0kb downstream 5.0kb downstream 13720 true scaffold_8: 4406296-4420015 Theobroma cacao
Thecc1EG034705 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4415016-4420015 Theobroma cacao
Thecc1EG034705 10.0kb upstream 10.0kb upstream 18720 true scaffold_8: 4396296-4415015 Theobroma cacao
Thecc1EG034705 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4396296-4406295 Theobroma cacao
Thecc1EG034705 10.0kb downstream 10.0kb downstream 18720 true scaffold_8: 4406296-4425015 Theobroma cacao
Thecc1EG034705 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4415016-4425015 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828557 5264 Brassicales-Malvales View MSA
124346706 5266 SBM View MSA
124244129 5268 Malvidae View MSA
124061088 5270 Rosid View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain