Gene : Thecc1EG034652 T. cacao v1.1

Defline:  (1 of 2) PTHR32467//PTHR32467:SF11 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT Genomic Order:  807
Name:  ? Thecc1EG034652 Secondary Identifier:  ? PAC:27458875

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034652 0.5kb upstream 0.5kb upstream 4875 true scaffold_8: 4131886-4136760 Theobroma cacao
Thecc1EG034652 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4136261-4136760 Theobroma cacao
Thecc1EG034652 0.5kb downstream 0.5kb downstream 4875 true scaffold_8: 4131386-4136260 Theobroma cacao
Thecc1EG034652 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4131386-4131885 Theobroma cacao
Thecc1EG034652 1.0kb upstream 1.0kb upstream 5375 true scaffold_8: 4131886-4137260 Theobroma cacao
Thecc1EG034652 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4136261-4137260 Theobroma cacao
Thecc1EG034652 1.0kb downstream 1.0kb downstream 5375 true scaffold_8: 4130886-4136260 Theobroma cacao
Thecc1EG034652 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4130886-4131885 Theobroma cacao
Thecc1EG034652 2.0kb upstream 2.0kb upstream 6375 true scaffold_8: 4131886-4138260 Theobroma cacao
Thecc1EG034652 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4136261-4138260 Theobroma cacao
Thecc1EG034652 2.0kb downstream 2.0kb downstream 6375 true scaffold_8: 4129886-4136260 Theobroma cacao
Thecc1EG034652 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4129886-4131885 Theobroma cacao
Thecc1EG034652 5.0kb upstream 5.0kb upstream 9375 true scaffold_8: 4131886-4141260 Theobroma cacao
Thecc1EG034652 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4136261-4141260 Theobroma cacao
Thecc1EG034652 5.0kb downstream 5.0kb downstream 9375 true scaffold_8: 4126886-4136260 Theobroma cacao
Thecc1EG034652 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4126886-4131885 Theobroma cacao
Thecc1EG034652 10.0kb upstream 10.0kb upstream 14375 true scaffold_8: 4131886-4146260 Theobroma cacao
Thecc1EG034652 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4136261-4146260 Theobroma cacao
Thecc1EG034652 10.0kb downstream 10.0kb downstream 14375 true scaffold_8: 4121886-4136260 Theobroma cacao
Thecc1EG034652 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4121886-4131885 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825661 5264 Brassicales-Malvales View MSA
124320700 5266 SBM View MSA
124251778 5268 Malvidae View MSA
124069509 5270 Rosid View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain