Gene : Thecc1EG034637 T. cacao v1.1
Defline:  (1 of 2) PTHR11751//PTHR11751:SF431 - SUBGROUP I AMINOTRANSFERASE RELATED // 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  796
Name:  ? Thecc1EG034637 Secondary Identifier:  ? PAC:27458773
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ETHYL-PWY Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034637 0.5kb upstream 0.5kb upstream 2928 true scaffold_8: 4070665-4073592 Theobroma cacao
Thecc1EG034637 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4073093-4073592 Theobroma cacao
Thecc1EG034637 0.5kb downstream 0.5kb downstream 2928 true scaffold_8: 4070165-4073092 Theobroma cacao
Thecc1EG034637 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4070165-4070664 Theobroma cacao
Thecc1EG034637 1.0kb upstream 1.0kb upstream 3428 true scaffold_8: 4070665-4074092 Theobroma cacao
Thecc1EG034637 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4073093-4074092 Theobroma cacao
Thecc1EG034637 1.0kb downstream 1.0kb downstream 3428 true scaffold_8: 4069665-4073092 Theobroma cacao
Thecc1EG034637 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4069665-4070664 Theobroma cacao
Thecc1EG034637 2.0kb upstream 2.0kb upstream 4428 true scaffold_8: 4070665-4075092 Theobroma cacao
Thecc1EG034637 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4073093-4075092 Theobroma cacao
Thecc1EG034637 2.0kb downstream 2.0kb downstream 4428 true scaffold_8: 4068665-4073092 Theobroma cacao
Thecc1EG034637 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4068665-4070664 Theobroma cacao
Thecc1EG034637 5.0kb upstream 5.0kb upstream 7428 true scaffold_8: 4070665-4078092 Theobroma cacao
Thecc1EG034637 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4073093-4078092 Theobroma cacao
Thecc1EG034637 5.0kb downstream 5.0kb downstream 7428 true scaffold_8: 4065665-4073092 Theobroma cacao
Thecc1EG034637 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4065665-4070664 Theobroma cacao
Thecc1EG034637 10.0kb upstream 10.0kb upstream 12428 true scaffold_8: 4070665-4083092 Theobroma cacao
Thecc1EG034637 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4073093-4083092 Theobroma cacao
Thecc1EG034637 10.0kb downstream 10.0kb downstream 12428 true scaffold_8: 4060665-4073092 Theobroma cacao
Thecc1EG034637 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4060665-4070664 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825609 5264 Brassicales-Malvales View MSA
124320675 5266 SBM View MSA
124248586 5268 Malvidae View MSA
124071888 5270 Rosid View MSA
123628062 5271 Pentapetalae View MSA
122662373 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain