Gene : Thecc1EG034627 T. cacao v1.1
Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  786
Name:  ? Thecc1EG034627 Secondary Identifier:  ? PAC:27457699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034627 0.5kb upstream 0.5kb upstream 5694 true scaffold_8: 3995294-4000987 Theobroma cacao
Thecc1EG034627 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3995294-3995793 Theobroma cacao
Thecc1EG034627 0.5kb downstream 0.5kb downstream 5694 true scaffold_8: 3995794-4001487 Theobroma cacao
Thecc1EG034627 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4000988-4001487 Theobroma cacao
Thecc1EG034627 1.0kb upstream 1.0kb upstream 6194 true scaffold_8: 3994794-4000987 Theobroma cacao
Thecc1EG034627 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3994794-3995793 Theobroma cacao
Thecc1EG034627 1.0kb downstream 1.0kb downstream 6194 true scaffold_8: 3995794-4001987 Theobroma cacao
Thecc1EG034627 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4000988-4001987 Theobroma cacao
Thecc1EG034627 2.0kb upstream 2.0kb upstream 7194 true scaffold_8: 3993794-4000987 Theobroma cacao
Thecc1EG034627 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3993794-3995793 Theobroma cacao
Thecc1EG034627 2.0kb downstream 2.0kb downstream 7194 true scaffold_8: 3995794-4002987 Theobroma cacao
Thecc1EG034627 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4000988-4002987 Theobroma cacao
Thecc1EG034627 5.0kb upstream 5.0kb upstream 10194 true scaffold_8: 3990794-4000987 Theobroma cacao
Thecc1EG034627 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3990794-3995793 Theobroma cacao
Thecc1EG034627 5.0kb downstream 5.0kb downstream 10194 true scaffold_8: 3995794-4005987 Theobroma cacao
Thecc1EG034627 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4000988-4005987 Theobroma cacao
Thecc1EG034627 10.0kb upstream 10.0kb upstream 15194 true scaffold_8: 3985794-4000987 Theobroma cacao
Thecc1EG034627 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3985794-3995793 Theobroma cacao
Thecc1EG034627 10.0kb downstream 10.0kb downstream 15194 true scaffold_8: 3995794-4010987 Theobroma cacao
Thecc1EG034627 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4000988-4010987 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841434 5264 Brassicales-Malvales View MSA
124345663 5266 SBM View MSA
124248525 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain