Gene : Thecc1EG034823 T. cacao v1.1
Defline:  (1 of 1) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  963
Name:  ? Thecc1EG034823 Secondary Identifier:  ? PAC:27457916
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034823 0.5kb upstream 0.5kb upstream 6138 true scaffold_8: 4963669-4969806 Theobroma cacao
Thecc1EG034823 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4963669-4964168 Theobroma cacao
Thecc1EG034823 0.5kb downstream 0.5kb downstream 6138 true scaffold_8: 4964169-4970306 Theobroma cacao
Thecc1EG034823 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4969807-4970306 Theobroma cacao
Thecc1EG034823 1.0kb upstream 1.0kb upstream 6638 true scaffold_8: 4963169-4969806 Theobroma cacao
Thecc1EG034823 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4963169-4964168 Theobroma cacao
Thecc1EG034823 1.0kb downstream 1.0kb downstream 6638 true scaffold_8: 4964169-4970806 Theobroma cacao
Thecc1EG034823 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4969807-4970806 Theobroma cacao
Thecc1EG034823 2.0kb upstream 2.0kb upstream 7638 true scaffold_8: 4962169-4969806 Theobroma cacao
Thecc1EG034823 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4962169-4964168 Theobroma cacao
Thecc1EG034823 2.0kb downstream 2.0kb downstream 7638 true scaffold_8: 4964169-4971806 Theobroma cacao
Thecc1EG034823 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4969807-4971806 Theobroma cacao
Thecc1EG034823 5.0kb upstream 5.0kb upstream 10638 true scaffold_8: 4959169-4969806 Theobroma cacao
Thecc1EG034823 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4959169-4964168 Theobroma cacao
Thecc1EG034823 5.0kb downstream 5.0kb downstream 10638 true scaffold_8: 4964169-4974806 Theobroma cacao
Thecc1EG034823 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4969807-4974806 Theobroma cacao
Thecc1EG034823 10.0kb upstream 10.0kb upstream 15638 true scaffold_8: 4954169-4969806 Theobroma cacao
Thecc1EG034823 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4954169-4964168 Theobroma cacao
Thecc1EG034823 10.0kb downstream 10.0kb downstream 15638 true scaffold_8: 4964169-4979806 Theobroma cacao
Thecc1EG034823 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4969807-4979806 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834471 5264 Brassicales-Malvales View MSA
124336935 5266 SBM View MSA
124238398 5268 Malvidae View MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain