Gene : Thecc1EG034825 T. cacao v1.1

Defline:  (1 of 1) PTHR10366//PTHR10366:SF355 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  964
Name:  ? Thecc1EG034825 Secondary Identifier:  ? PAC:27458166

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034825 0.5kb upstream 0.5kb upstream 3772 true scaffold_8: 4969842-4973613 Theobroma cacao
Thecc1EG034825 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4973114-4973613 Theobroma cacao
Thecc1EG034825 0.5kb downstream 0.5kb downstream 3772 true scaffold_8: 4969342-4973113 Theobroma cacao
Thecc1EG034825 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4969342-4969841 Theobroma cacao
Thecc1EG034825 1.0kb upstream 1.0kb upstream 4272 true scaffold_8: 4969842-4974113 Theobroma cacao
Thecc1EG034825 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4973114-4974113 Theobroma cacao
Thecc1EG034825 1.0kb downstream 1.0kb downstream 4272 true scaffold_8: 4968842-4973113 Theobroma cacao
Thecc1EG034825 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4968842-4969841 Theobroma cacao
Thecc1EG034825 2.0kb upstream 2.0kb upstream 5272 true scaffold_8: 4969842-4975113 Theobroma cacao
Thecc1EG034825 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4973114-4975113 Theobroma cacao
Thecc1EG034825 2.0kb downstream 2.0kb downstream 5272 true scaffold_8: 4967842-4973113 Theobroma cacao
Thecc1EG034825 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4967842-4969841 Theobroma cacao
Thecc1EG034825 5.0kb upstream 5.0kb upstream 8272 true scaffold_8: 4969842-4978113 Theobroma cacao
Thecc1EG034825 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4973114-4978113 Theobroma cacao
Thecc1EG034825 5.0kb downstream 5.0kb downstream 8272 true scaffold_8: 4964842-4973113 Theobroma cacao
Thecc1EG034825 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4964842-4969841 Theobroma cacao
Thecc1EG034825 10.0kb upstream 10.0kb upstream 13272 true scaffold_8: 4969842-4983113 Theobroma cacao
Thecc1EG034825 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4973114-4983113 Theobroma cacao
Thecc1EG034825 10.0kb downstream 10.0kb downstream 13272 true scaffold_8: 4959842-4973113 Theobroma cacao
Thecc1EG034825 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4959842-4969841 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828461 5264 Brassicales-Malvales View MSA
124345390 5266 SBM View MSA
124238156 5268 Malvidae View MSA
124065081 5270 Rosid View MSA
123737236 5271 Pentapetalae View MSA
122787210 5272 Eudicot View MSA
122044697 5273 Angiosperm View MSA
121343909 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain