Gene : Thecc1EG034819 T. cacao v1.1
Defline:  (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  960
Name:  ? Thecc1EG034819 Secondary Identifier:  ? PAC:27456925
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034819 0.5kb upstream 0.5kb upstream 5591 true scaffold_8: 4950638-4956228 Theobroma cacao
Thecc1EG034819 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4950638-4951137 Theobroma cacao
Thecc1EG034819 0.5kb downstream 0.5kb downstream 5591 true scaffold_8: 4951138-4956728 Theobroma cacao
Thecc1EG034819 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4956229-4956728 Theobroma cacao
Thecc1EG034819 1.0kb upstream 1.0kb upstream 6091 true scaffold_8: 4950138-4956228 Theobroma cacao
Thecc1EG034819 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4950138-4951137 Theobroma cacao
Thecc1EG034819 1.0kb downstream 1.0kb downstream 6091 true scaffold_8: 4951138-4957228 Theobroma cacao
Thecc1EG034819 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4956229-4957228 Theobroma cacao
Thecc1EG034819 2.0kb upstream 2.0kb upstream 7091 true scaffold_8: 4949138-4956228 Theobroma cacao
Thecc1EG034819 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4949138-4951137 Theobroma cacao
Thecc1EG034819 2.0kb downstream 2.0kb downstream 7091 true scaffold_8: 4951138-4958228 Theobroma cacao
Thecc1EG034819 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4956229-4958228 Theobroma cacao
Thecc1EG034819 5.0kb upstream 5.0kb upstream 10091 true scaffold_8: 4946138-4956228 Theobroma cacao
Thecc1EG034819 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4946138-4951137 Theobroma cacao
Thecc1EG034819 5.0kb downstream 5.0kb downstream 10091 true scaffold_8: 4951138-4961228 Theobroma cacao
Thecc1EG034819 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4956229-4961228 Theobroma cacao
Thecc1EG034819 10.0kb upstream 10.0kb upstream 15091 true scaffold_8: 4941138-4956228 Theobroma cacao
Thecc1EG034819 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4941138-4951137 Theobroma cacao
Thecc1EG034819 10.0kb downstream 10.0kb downstream 15091 true scaffold_8: 4951138-4966228 Theobroma cacao
Thecc1EG034819 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4956229-4966228 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833515 5264 Brassicales-Malvales View MSA
124340972 5266 SBM View MSA
124242149 5268 Malvidae View MSA
124065474 5270 Rosid View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain