Gene : Thecc1EG034814 T. cacao v1.1
Defline:  (1 of 3) 1.1.1.34 - Hydroxymethylglutaryl-CoA reductase (NADPH) / HMG-CoA reductase Genomic Order:  955
Name:  ? Thecc1EG034814 Secondary Identifier:  ? PAC:27456982
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034814 0.5kb upstream 0.5kb upstream 4402 true scaffold_8: 4935208-4939609 Theobroma cacao
Thecc1EG034814 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4939110-4939609 Theobroma cacao
Thecc1EG034814 0.5kb downstream 0.5kb downstream 4402 true scaffold_8: 4934708-4939109 Theobroma cacao
Thecc1EG034814 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4934708-4935207 Theobroma cacao
Thecc1EG034814 1.0kb upstream 1.0kb upstream 4902 true scaffold_8: 4935208-4940109 Theobroma cacao
Thecc1EG034814 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4939110-4940109 Theobroma cacao
Thecc1EG034814 1.0kb downstream 1.0kb downstream 4902 true scaffold_8: 4934208-4939109 Theobroma cacao
Thecc1EG034814 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4934208-4935207 Theobroma cacao
Thecc1EG034814 2.0kb upstream 2.0kb upstream 5902 true scaffold_8: 4935208-4941109 Theobroma cacao
Thecc1EG034814 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4939110-4941109 Theobroma cacao
Thecc1EG034814 2.0kb downstream 2.0kb downstream 5902 true scaffold_8: 4933208-4939109 Theobroma cacao
Thecc1EG034814 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4933208-4935207 Theobroma cacao
Thecc1EG034814 5.0kb upstream 5.0kb upstream 8902 true scaffold_8: 4935208-4944109 Theobroma cacao
Thecc1EG034814 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4939110-4944109 Theobroma cacao
Thecc1EG034814 5.0kb downstream 5.0kb downstream 8902 true scaffold_8: 4930208-4939109 Theobroma cacao
Thecc1EG034814 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4930208-4935207 Theobroma cacao
Thecc1EG034814 10.0kb upstream 10.0kb upstream 13902 true scaffold_8: 4935208-4949109 Theobroma cacao
Thecc1EG034814 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4939110-4949109 Theobroma cacao
Thecc1EG034814 10.0kb downstream 10.0kb downstream 13902 true scaffold_8: 4925208-4939109 Theobroma cacao
Thecc1EG034814 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4925208-4935207 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840329 5264 Brassicales-Malvales View MSA
124347727 5266 SBM View MSA
124239533 5268 Malvidae View MSA
124072826 5270 Rosid View MSA
123751436 5271 Pentapetalae View MSA
122791870 5272 Eudicot View MSA
122051392 5273 Angiosperm View MSA
121350752 5274 Embryophyte View MSA
123381875 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain