Gene : Thecc1EG034785 T. cacao v1.1
Defline:  (1 of 1) PTHR13301//PTHR13301:SF73 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  931
Name:  ? Thecc1EG034785 Secondary Identifier:  ? PAC:27456946
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034785 0.5kb upstream 0.5kb upstream 6142 true scaffold_8: 4786382-4792523 Theobroma cacao
Thecc1EG034785 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4792024-4792523 Theobroma cacao
Thecc1EG034785 0.5kb downstream 0.5kb downstream 6142 true scaffold_8: 4785882-4792023 Theobroma cacao
Thecc1EG034785 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4785882-4786381 Theobroma cacao
Thecc1EG034785 1.0kb upstream 1.0kb upstream 6642 true scaffold_8: 4786382-4793023 Theobroma cacao
Thecc1EG034785 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4792024-4793023 Theobroma cacao
Thecc1EG034785 1.0kb downstream 1.0kb downstream 6642 true scaffold_8: 4785382-4792023 Theobroma cacao
Thecc1EG034785 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4785382-4786381 Theobroma cacao
Thecc1EG034785 2.0kb upstream 2.0kb upstream 7642 true scaffold_8: 4786382-4794023 Theobroma cacao
Thecc1EG034785 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4792024-4794023 Theobroma cacao
Thecc1EG034785 2.0kb downstream 2.0kb downstream 7642 true scaffold_8: 4784382-4792023 Theobroma cacao
Thecc1EG034785 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4784382-4786381 Theobroma cacao
Thecc1EG034785 5.0kb upstream 5.0kb upstream 10642 true scaffold_8: 4786382-4797023 Theobroma cacao
Thecc1EG034785 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4792024-4797023 Theobroma cacao
Thecc1EG034785 5.0kb downstream 5.0kb downstream 10642 true scaffold_8: 4781382-4792023 Theobroma cacao
Thecc1EG034785 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4781382-4786381 Theobroma cacao
Thecc1EG034785 10.0kb upstream 10.0kb upstream 15642 true scaffold_8: 4786382-4802023 Theobroma cacao
Thecc1EG034785 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4792024-4802023 Theobroma cacao
Thecc1EG034785 10.0kb downstream 10.0kb downstream 15642 true scaffold_8: 4776382-4792023 Theobroma cacao
Thecc1EG034785 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4776382-4786381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827326 5264 Brassicales-Malvales View MSA
124351037 5266 SBM View MSA
124248532 5268 Malvidae View MSA
124071949 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain