Gene : Thecc1EG035035 T. cacao v1.1
Defline:  (1 of 1) 6.3.4.11 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase Genomic Order:  1147
Name:  ? Thecc1EG035035 Secondary Identifier:  ? PAC:27457596
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1264 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035035 0.5kb upstream 0.5kb upstream 6444 true scaffold_8: 6136150-6142593 Theobroma cacao
Thecc1EG035035 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6142094-6142593 Theobroma cacao
Thecc1EG035035 0.5kb downstream 0.5kb downstream 6444 true scaffold_8: 6135650-6142093 Theobroma cacao
Thecc1EG035035 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6135650-6136149 Theobroma cacao
Thecc1EG035035 1.0kb upstream 1.0kb upstream 6944 true scaffold_8: 6136150-6143093 Theobroma cacao
Thecc1EG035035 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6142094-6143093 Theobroma cacao
Thecc1EG035035 1.0kb downstream 1.0kb downstream 6944 true scaffold_8: 6135150-6142093 Theobroma cacao
Thecc1EG035035 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6135150-6136149 Theobroma cacao
Thecc1EG035035 2.0kb upstream 2.0kb upstream 7944 true scaffold_8: 6136150-6144093 Theobroma cacao
Thecc1EG035035 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6142094-6144093 Theobroma cacao
Thecc1EG035035 2.0kb downstream 2.0kb downstream 7944 true scaffold_8: 6134150-6142093 Theobroma cacao
Thecc1EG035035 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6134150-6136149 Theobroma cacao
Thecc1EG035035 5.0kb upstream 5.0kb upstream 10944 true scaffold_8: 6136150-6147093 Theobroma cacao
Thecc1EG035035 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6142094-6147093 Theobroma cacao
Thecc1EG035035 5.0kb downstream 5.0kb downstream 10944 true scaffold_8: 6131150-6142093 Theobroma cacao
Thecc1EG035035 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6131150-6136149 Theobroma cacao
Thecc1EG035035 10.0kb upstream 10.0kb upstream 15944 true scaffold_8: 6136150-6152093 Theobroma cacao
Thecc1EG035035 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6142094-6152093 Theobroma cacao
Thecc1EG035035 10.0kb downstream 10.0kb downstream 15944 true scaffold_8: 6126150-6142093 Theobroma cacao
Thecc1EG035035 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6126150-6136149 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830667 5264 Brassicales-Malvales View MSA
124340831 5266 SBM View MSA
124239108 5268 Malvidae View MSA
124067160 5270 Rosid View MSA
123748341 5271 Pentapetalae View MSA
122792571 5272 Eudicot View MSA
122046885 5273 Angiosperm View MSA
121347515 5274 Embryophyte View MSA
123426714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain