Gene : Thecc1EG034995 T. cacao v1.1
Defline:  (1 of 1) 6.3.2.5 - Phosphopantothenate--cysteine ligase / Phosphopantothenoylcysteine synthetase Genomic Order:  1112
Name:  ? Thecc1EG034995 Secondary Identifier:  ? PAC:27456632
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao COA-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034995 0.5kb upstream 0.5kb upstream 5871 true scaffold_8: 5889539-5895409 Theobroma cacao
Thecc1EG034995 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5894910-5895409 Theobroma cacao
Thecc1EG034995 0.5kb downstream 0.5kb downstream 5871 true scaffold_8: 5889039-5894909 Theobroma cacao
Thecc1EG034995 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5889039-5889538 Theobroma cacao
Thecc1EG034995 1.0kb upstream 1.0kb upstream 6371 true scaffold_8: 5889539-5895909 Theobroma cacao
Thecc1EG034995 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5894910-5895909 Theobroma cacao
Thecc1EG034995 1.0kb downstream 1.0kb downstream 6371 true scaffold_8: 5888539-5894909 Theobroma cacao
Thecc1EG034995 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5888539-5889538 Theobroma cacao
Thecc1EG034995 2.0kb upstream 2.0kb upstream 7371 true scaffold_8: 5889539-5896909 Theobroma cacao
Thecc1EG034995 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5894910-5896909 Theobroma cacao
Thecc1EG034995 2.0kb downstream 2.0kb downstream 7371 true scaffold_8: 5887539-5894909 Theobroma cacao
Thecc1EG034995 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5887539-5889538 Theobroma cacao
Thecc1EG034995 5.0kb upstream 5.0kb upstream 10371 true scaffold_8: 5889539-5899909 Theobroma cacao
Thecc1EG034995 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5894910-5899909 Theobroma cacao
Thecc1EG034995 5.0kb downstream 5.0kb downstream 10371 true scaffold_8: 5884539-5894909 Theobroma cacao
Thecc1EG034995 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5884539-5889538 Theobroma cacao
Thecc1EG034995 10.0kb upstream 10.0kb upstream 15371 true scaffold_8: 5889539-5904909 Theobroma cacao
Thecc1EG034995 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5894910-5904909 Theobroma cacao
Thecc1EG034995 10.0kb downstream 10.0kb downstream 15371 true scaffold_8: 5879539-5894909 Theobroma cacao
Thecc1EG034995 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5879539-5889538 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833766 5264 Brassicales-Malvales View MSA
124345147 5266 SBM View MSA
124250863 5268 Malvidae View MSA
124065288 5270 Rosid View MSA
123750270 5271 Pentapetalae View MSA
122791769 5272 Eudicot View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain