Gene : Thecc1EG034979 T. cacao v1.1
Defline:  (1 of 1) KOG0978//KOG0995 - E3 ubiquitin ligase involved in syntaxin degradation // Centromere-associated protein HEC1 Genomic Order:  1097
Name:  ? Thecc1EG034979 Secondary Identifier:  ? PAC:27457770
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034979 0.5kb upstream 0.5kb upstream 13277 true scaffold_8: 5807201-5820477 Theobroma cacao
Thecc1EG034979 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5819978-5820477 Theobroma cacao
Thecc1EG034979 0.5kb downstream 0.5kb downstream 13277 true scaffold_8: 5806701-5819977 Theobroma cacao
Thecc1EG034979 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5806701-5807200 Theobroma cacao
Thecc1EG034979 1.0kb upstream 1.0kb upstream 13777 true scaffold_8: 5807201-5820977 Theobroma cacao
Thecc1EG034979 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5819978-5820977 Theobroma cacao
Thecc1EG034979 1.0kb downstream 1.0kb downstream 13777 true scaffold_8: 5806201-5819977 Theobroma cacao
Thecc1EG034979 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5806201-5807200 Theobroma cacao
Thecc1EG034979 2.0kb upstream 2.0kb upstream 14777 true scaffold_8: 5807201-5821977 Theobroma cacao
Thecc1EG034979 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5819978-5821977 Theobroma cacao
Thecc1EG034979 2.0kb downstream 2.0kb downstream 14777 true scaffold_8: 5805201-5819977 Theobroma cacao
Thecc1EG034979 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5805201-5807200 Theobroma cacao
Thecc1EG034979 5.0kb upstream 5.0kb upstream 17777 true scaffold_8: 5807201-5824977 Theobroma cacao
Thecc1EG034979 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5819978-5824977 Theobroma cacao
Thecc1EG034979 5.0kb downstream 5.0kb downstream 17777 true scaffold_8: 5802201-5819977 Theobroma cacao
Thecc1EG034979 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5802201-5807200 Theobroma cacao
Thecc1EG034979 10.0kb upstream 10.0kb upstream 22777 true scaffold_8: 5807201-5829977 Theobroma cacao
Thecc1EG034979 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5819978-5829977 Theobroma cacao
Thecc1EG034979 10.0kb downstream 10.0kb downstream 22777 true scaffold_8: 5797201-5819977 Theobroma cacao
Thecc1EG034979 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5797201-5807200 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834299 5264 Brassicales-Malvales View MSA
124339610 5266 SBM View MSA
124237779 5268 Malvidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain