Gene : Thecc1EG034983 T. cacao v1.1
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  1100
Name:  ? Thecc1EG034983 Secondary Identifier:  ? PAC:27459415
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5097 Theobroma cacao pathologic  
Tcacao PWY-724 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034983 0.5kb upstream 0.5kb upstream 6727 true scaffold_8: 5826298-5833024 Theobroma cacao
Thecc1EG034983 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5832525-5833024 Theobroma cacao
Thecc1EG034983 0.5kb downstream 0.5kb downstream 6727 true scaffold_8: 5825798-5832524 Theobroma cacao
Thecc1EG034983 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5825798-5826297 Theobroma cacao
Thecc1EG034983 1.0kb upstream 1.0kb upstream 7227 true scaffold_8: 5826298-5833524 Theobroma cacao
Thecc1EG034983 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5832525-5833524 Theobroma cacao
Thecc1EG034983 1.0kb downstream 1.0kb downstream 7227 true scaffold_8: 5825298-5832524 Theobroma cacao
Thecc1EG034983 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5825298-5826297 Theobroma cacao
Thecc1EG034983 2.0kb upstream 2.0kb upstream 8227 true scaffold_8: 5826298-5834524 Theobroma cacao
Thecc1EG034983 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5832525-5834524 Theobroma cacao
Thecc1EG034983 2.0kb downstream 2.0kb downstream 8227 true scaffold_8: 5824298-5832524 Theobroma cacao
Thecc1EG034983 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5824298-5826297 Theobroma cacao
Thecc1EG034983 5.0kb upstream 5.0kb upstream 11227 true scaffold_8: 5826298-5837524 Theobroma cacao
Thecc1EG034983 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5832525-5837524 Theobroma cacao
Thecc1EG034983 5.0kb downstream 5.0kb downstream 11227 true scaffold_8: 5821298-5832524 Theobroma cacao
Thecc1EG034983 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5821298-5826297 Theobroma cacao
Thecc1EG034983 10.0kb upstream 10.0kb upstream 16227 true scaffold_8: 5826298-5842524 Theobroma cacao
Thecc1EG034983 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5832525-5842524 Theobroma cacao
Thecc1EG034983 10.0kb downstream 10.0kb downstream 16227 true scaffold_8: 5816298-5832524 Theobroma cacao
Thecc1EG034983 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5816298-5826297 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824775 5264 Brassicales-Malvales View MSA
124350184 5266 SBM View MSA
124244486 5268 Malvidae View MSA
124072103 5270 Rosid View MSA
123748238 5271 Pentapetalae View MSA
122790748 5272 Eudicot View MSA
122049713 5273 Angiosperm View MSA
121311556 5274 Embryophyte View MSA
123348837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain