Gene : Thecc1EG034952 T. cacao v1.1
Defline:  (1 of 2) PTHR31614//PTHR31614:SF5 - FAMILY NOT NAMED // ALLERGEN-LIKE PROTEIN BRSN20-RELATED Genomic Order:  1072
Name:  ? Thecc1EG034952 Secondary Identifier:  ? PAC:27458349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034952 0.5kb upstream 0.5kb upstream 3135 true scaffold_8: 5645951-5649085 Theobroma cacao
Thecc1EG034952 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5648586-5649085 Theobroma cacao
Thecc1EG034952 0.5kb downstream 0.5kb downstream 3135 true scaffold_8: 5645451-5648585 Theobroma cacao
Thecc1EG034952 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5645451-5645950 Theobroma cacao
Thecc1EG034952 1.0kb upstream 1.0kb upstream 3635 true scaffold_8: 5645951-5649585 Theobroma cacao
Thecc1EG034952 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5648586-5649585 Theobroma cacao
Thecc1EG034952 1.0kb downstream 1.0kb downstream 3635 true scaffold_8: 5644951-5648585 Theobroma cacao
Thecc1EG034952 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5644951-5645950 Theobroma cacao
Thecc1EG034952 2.0kb upstream 2.0kb upstream 4635 true scaffold_8: 5645951-5650585 Theobroma cacao
Thecc1EG034952 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5648586-5650585 Theobroma cacao
Thecc1EG034952 2.0kb downstream 2.0kb downstream 4635 true scaffold_8: 5643951-5648585 Theobroma cacao
Thecc1EG034952 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5643951-5645950 Theobroma cacao
Thecc1EG034952 5.0kb upstream 5.0kb upstream 7635 true scaffold_8: 5645951-5653585 Theobroma cacao
Thecc1EG034952 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5648586-5653585 Theobroma cacao
Thecc1EG034952 5.0kb downstream 5.0kb downstream 7635 true scaffold_8: 5640951-5648585 Theobroma cacao
Thecc1EG034952 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5640951-5645950 Theobroma cacao
Thecc1EG034952 10.0kb upstream 10.0kb upstream 12635 true scaffold_8: 5645951-5658585 Theobroma cacao
Thecc1EG034952 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5648586-5658585 Theobroma cacao
Thecc1EG034952 10.0kb downstream 10.0kb downstream 12635 true scaffold_8: 5635951-5648585 Theobroma cacao
Thecc1EG034952 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5635951-5645950 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837904 5264 Brassicales-Malvales View MSA
124336938 5266 SBM View MSA
124243301 5268 Malvidae View MSA
124073821 5270 Rosid View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain