Gene : Thecc1EG034942 T. cacao v1.1
Defline:  (1 of 2) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1064
Name:  ? Thecc1EG034942 Secondary Identifier:  ? PAC:27458777
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034942 0.5kb upstream 0.5kb upstream 7420 true scaffold_8: 5560873-5568292 Theobroma cacao
Thecc1EG034942 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5567793-5568292 Theobroma cacao
Thecc1EG034942 0.5kb downstream 0.5kb downstream 7420 true scaffold_8: 5560373-5567792 Theobroma cacao
Thecc1EG034942 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5560373-5560872 Theobroma cacao
Thecc1EG034942 1.0kb upstream 1.0kb upstream 7920 true scaffold_8: 5560873-5568792 Theobroma cacao
Thecc1EG034942 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5567793-5568792 Theobroma cacao
Thecc1EG034942 1.0kb downstream 1.0kb downstream 7920 true scaffold_8: 5559873-5567792 Theobroma cacao
Thecc1EG034942 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5559873-5560872 Theobroma cacao
Thecc1EG034942 2.0kb upstream 2.0kb upstream 8920 true scaffold_8: 5560873-5569792 Theobroma cacao
Thecc1EG034942 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5567793-5569792 Theobroma cacao
Thecc1EG034942 2.0kb downstream 2.0kb downstream 8920 true scaffold_8: 5558873-5567792 Theobroma cacao
Thecc1EG034942 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5558873-5560872 Theobroma cacao
Thecc1EG034942 5.0kb upstream 5.0kb upstream 11920 true scaffold_8: 5560873-5572792 Theobroma cacao
Thecc1EG034942 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5567793-5572792 Theobroma cacao
Thecc1EG034942 5.0kb downstream 5.0kb downstream 11920 true scaffold_8: 5555873-5567792 Theobroma cacao
Thecc1EG034942 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5555873-5560872 Theobroma cacao
Thecc1EG034942 10.0kb upstream 10.0kb upstream 16920 true scaffold_8: 5560873-5577792 Theobroma cacao
Thecc1EG034942 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5567793-5577792 Theobroma cacao
Thecc1EG034942 10.0kb downstream 10.0kb downstream 16920 true scaffold_8: 5550873-5567792 Theobroma cacao
Thecc1EG034942 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5550873-5560872 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822374 5264 Brassicales-Malvales Singleton cluster - no MSA
124318511 5266 SBM Singleton cluster - no MSA
124248802 5268 Malvidae View MSA
124063136 5270 Rosid View MSA
123741665 5271 Pentapetalae View MSA
122789476 5272 Eudicot View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain