Gene : Thecc1EG035198 T. cacao v1.1
Defline:  (1 of 30) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1280
Name:  ? Thecc1EG035198 Secondary Identifier:  ? PAC:27458454
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035198 0.5kb upstream 0.5kb upstream 3898 true scaffold_8: 7023005-7026902 Theobroma cacao
Thecc1EG035198 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7023005-7023504 Theobroma cacao
Thecc1EG035198 0.5kb downstream 0.5kb downstream 3898 true scaffold_8: 7023505-7027402 Theobroma cacao
Thecc1EG035198 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7026903-7027402 Theobroma cacao
Thecc1EG035198 1.0kb upstream 1.0kb upstream 4398 true scaffold_8: 7022505-7026902 Theobroma cacao
Thecc1EG035198 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7022505-7023504 Theobroma cacao
Thecc1EG035198 1.0kb downstream 1.0kb downstream 4398 true scaffold_8: 7023505-7027902 Theobroma cacao
Thecc1EG035198 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7026903-7027902 Theobroma cacao
Thecc1EG035198 2.0kb upstream 2.0kb upstream 5398 true scaffold_8: 7021505-7026902 Theobroma cacao
Thecc1EG035198 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7021505-7023504 Theobroma cacao
Thecc1EG035198 2.0kb downstream 2.0kb downstream 5398 true scaffold_8: 7023505-7028902 Theobroma cacao
Thecc1EG035198 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7026903-7028902 Theobroma cacao
Thecc1EG035198 5.0kb upstream 5.0kb upstream 8398 true scaffold_8: 7018505-7026902 Theobroma cacao
Thecc1EG035198 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7018505-7023504 Theobroma cacao
Thecc1EG035198 5.0kb downstream 5.0kb downstream 8398 true scaffold_8: 7023505-7031902 Theobroma cacao
Thecc1EG035198 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7026903-7031902 Theobroma cacao
Thecc1EG035198 10.0kb upstream 10.0kb upstream 13398 true scaffold_8: 7013505-7026902 Theobroma cacao
Thecc1EG035198 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7013505-7023504 Theobroma cacao
Thecc1EG035198 10.0kb downstream 10.0kb downstream 13398 true scaffold_8: 7023505-7036902 Theobroma cacao
Thecc1EG035198 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7026903-7036902 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829423 5264 Brassicales-Malvales View MSA
124337568 5266 SBM View MSA
124240725 5268 Malvidae View MSA
124066699 5270 Rosid View MSA
123739132 5271 Pentapetalae View MSA
122788969 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain