Gene : Thecc1EG035141 T. cacao v1.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF62 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Genomic Order:  1233
Name:  ? Thecc1EG035141 Secondary Identifier:  ? PAC:27456919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035141 0.5kb upstream 0.5kb upstream 6247 true scaffold_8: 6697300-6703546 Theobroma cacao
Thecc1EG035141 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6697300-6697799 Theobroma cacao
Thecc1EG035141 0.5kb downstream 0.5kb downstream 6247 true scaffold_8: 6697800-6704046 Theobroma cacao
Thecc1EG035141 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6703547-6704046 Theobroma cacao
Thecc1EG035141 1.0kb upstream 1.0kb upstream 6747 true scaffold_8: 6696800-6703546 Theobroma cacao
Thecc1EG035141 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6696800-6697799 Theobroma cacao
Thecc1EG035141 1.0kb downstream 1.0kb downstream 6747 true scaffold_8: 6697800-6704546 Theobroma cacao
Thecc1EG035141 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6703547-6704546 Theobroma cacao
Thecc1EG035141 2.0kb upstream 2.0kb upstream 7747 true scaffold_8: 6695800-6703546 Theobroma cacao
Thecc1EG035141 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6695800-6697799 Theobroma cacao
Thecc1EG035141 2.0kb downstream 2.0kb downstream 7747 true scaffold_8: 6697800-6705546 Theobroma cacao
Thecc1EG035141 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6703547-6705546 Theobroma cacao
Thecc1EG035141 5.0kb upstream 5.0kb upstream 10747 true scaffold_8: 6692800-6703546 Theobroma cacao
Thecc1EG035141 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6692800-6697799 Theobroma cacao
Thecc1EG035141 5.0kb downstream 5.0kb downstream 10747 true scaffold_8: 6697800-6708546 Theobroma cacao
Thecc1EG035141 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6703547-6708546 Theobroma cacao
Thecc1EG035141 10.0kb upstream 10.0kb upstream 15747 true scaffold_8: 6687800-6703546 Theobroma cacao
Thecc1EG035141 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6687800-6697799 Theobroma cacao
Thecc1EG035141 10.0kb downstream 10.0kb downstream 15747 true scaffold_8: 6697800-6713546 Theobroma cacao
Thecc1EG035141 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6703547-6713546 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837404 5264 Brassicales-Malvales View MSA
124343593 5266 SBM View MSA
124249745 5268 Malvidae View MSA
124061387 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain