Gene : Thecc1EG035122 T. cacao v1.1
Defline:  (1 of 1) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  1218
Name:  ? Thecc1EG035122 Secondary Identifier:  ? PAC:27457387
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5068 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035122 0.5kb upstream 0.5kb upstream 26044 true scaffold_8: 6606875-6632918 Theobroma cacao
Thecc1EG035122 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6606875-6607374 Theobroma cacao
Thecc1EG035122 0.5kb downstream 0.5kb downstream 26044 true scaffold_8: 6607375-6633418 Theobroma cacao
Thecc1EG035122 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6632919-6633418 Theobroma cacao
Thecc1EG035122 1.0kb upstream 1.0kb upstream 26544 true scaffold_8: 6606375-6632918 Theobroma cacao
Thecc1EG035122 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6606375-6607374 Theobroma cacao
Thecc1EG035122 1.0kb downstream 1.0kb downstream 26544 true scaffold_8: 6607375-6633918 Theobroma cacao
Thecc1EG035122 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6632919-6633918 Theobroma cacao
Thecc1EG035122 2.0kb upstream 2.0kb upstream 27544 true scaffold_8: 6605375-6632918 Theobroma cacao
Thecc1EG035122 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6605375-6607374 Theobroma cacao
Thecc1EG035122 2.0kb downstream 2.0kb downstream 27544 true scaffold_8: 6607375-6634918 Theobroma cacao
Thecc1EG035122 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6632919-6634918 Theobroma cacao
Thecc1EG035122 5.0kb upstream 5.0kb upstream 30544 true scaffold_8: 6602375-6632918 Theobroma cacao
Thecc1EG035122 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6602375-6607374 Theobroma cacao
Thecc1EG035122 5.0kb downstream 5.0kb downstream 30544 true scaffold_8: 6607375-6637918 Theobroma cacao
Thecc1EG035122 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6632919-6637918 Theobroma cacao
Thecc1EG035122 10.0kb upstream 10.0kb upstream 35544 true scaffold_8: 6597375-6632918 Theobroma cacao
Thecc1EG035122 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6597375-6607374 Theobroma cacao
Thecc1EG035122 10.0kb downstream 10.0kb downstream 35544 true scaffold_8: 6607375-6642918 Theobroma cacao
Thecc1EG035122 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6632919-6642918 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838199 5264 Brassicales-Malvales View MSA
124342247 5266 SBM View MSA
124242720 5268 Malvidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain