Gene : Thecc1EG035451 T. cacao v1.1
Defline:  (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45) Genomic Order:  1419
Name:  ? Thecc1EG035451 Secondary Identifier:  ? PAC:27458780
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035451 0.5kb upstream 0.5kb upstream 8606 true scaffold_8: 9062353-9070958 Theobroma cacao
Thecc1EG035451 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9062353-9062852 Theobroma cacao
Thecc1EG035451 0.5kb downstream 0.5kb downstream 8606 true scaffold_8: 9062853-9071458 Theobroma cacao
Thecc1EG035451 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9070959-9071458 Theobroma cacao
Thecc1EG035451 1.0kb upstream 1.0kb upstream 9106 true scaffold_8: 9061853-9070958 Theobroma cacao
Thecc1EG035451 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9061853-9062852 Theobroma cacao
Thecc1EG035451 1.0kb downstream 1.0kb downstream 9106 true scaffold_8: 9062853-9071958 Theobroma cacao
Thecc1EG035451 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9070959-9071958 Theobroma cacao
Thecc1EG035451 2.0kb upstream 2.0kb upstream 10106 true scaffold_8: 9060853-9070958 Theobroma cacao
Thecc1EG035451 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9060853-9062852 Theobroma cacao
Thecc1EG035451 2.0kb downstream 2.0kb downstream 10106 true scaffold_8: 9062853-9072958 Theobroma cacao
Thecc1EG035451 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9070959-9072958 Theobroma cacao
Thecc1EG035451 5.0kb upstream 5.0kb upstream 13106 true scaffold_8: 9057853-9070958 Theobroma cacao
Thecc1EG035451 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9057853-9062852 Theobroma cacao
Thecc1EG035451 5.0kb downstream 5.0kb downstream 13106 true scaffold_8: 9062853-9075958 Theobroma cacao
Thecc1EG035451 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9070959-9075958 Theobroma cacao
Thecc1EG035451 10.0kb upstream 10.0kb upstream 18106 true scaffold_8: 9052853-9070958 Theobroma cacao
Thecc1EG035451 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9052853-9062852 Theobroma cacao
Thecc1EG035451 10.0kb downstream 10.0kb downstream 18106 true scaffold_8: 9062853-9080958 Theobroma cacao
Thecc1EG035451 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9070959-9080958 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830189 5264 Brassicales-Malvales View MSA
124339762 5266 SBM View MSA
124239986 5268 Malvidae View MSA
124069104 5270 Rosid View MSA
123737015 5271 Pentapetalae View MSA
122795036 5272 Eudicot View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain