Gene : Thecc1EG035427 T. cacao v1.1
Defline:  (1 of 1) PTHR11695//PTHR11695:SF432//PTHR11695:SF576 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED // ALCOHOL DEHYDROGENASE CLASS-P Genomic Order:  1405
Name:  ? Thecc1EG035427 Secondary Identifier:  ? PAC:27457609
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5486 Theobroma cacao pathologic  
Tcacao PWY-5751 Theobroma cacao pathologic  
Tcacao PWY-6333 Theobroma cacao pathologic  
Tcacao PWY66-21 Theobroma cacao pathologic  
Tcacao PWY66-389 Theobroma cacao pathologic  
Tcacao PWY-6802 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035427 0.5kb upstream 0.5kb upstream 3183 true scaffold_8: 8880948-8884130 Theobroma cacao
Thecc1EG035427 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8883631-8884130 Theobroma cacao
Thecc1EG035427 0.5kb downstream 0.5kb downstream 3183 true scaffold_8: 8880448-8883630 Theobroma cacao
Thecc1EG035427 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8880448-8880947 Theobroma cacao
Thecc1EG035427 1.0kb upstream 1.0kb upstream 3683 true scaffold_8: 8880948-8884630 Theobroma cacao
Thecc1EG035427 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8883631-8884630 Theobroma cacao
Thecc1EG035427 1.0kb downstream 1.0kb downstream 3683 true scaffold_8: 8879948-8883630 Theobroma cacao
Thecc1EG035427 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8879948-8880947 Theobroma cacao
Thecc1EG035427 2.0kb upstream 2.0kb upstream 4683 true scaffold_8: 8880948-8885630 Theobroma cacao
Thecc1EG035427 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8883631-8885630 Theobroma cacao
Thecc1EG035427 2.0kb downstream 2.0kb downstream 4683 true scaffold_8: 8878948-8883630 Theobroma cacao
Thecc1EG035427 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8878948-8880947 Theobroma cacao
Thecc1EG035427 5.0kb upstream 5.0kb upstream 7683 true scaffold_8: 8880948-8888630 Theobroma cacao
Thecc1EG035427 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8883631-8888630 Theobroma cacao
Thecc1EG035427 5.0kb downstream 5.0kb downstream 7683 true scaffold_8: 8875948-8883630 Theobroma cacao
Thecc1EG035427 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8875948-8880947 Theobroma cacao
Thecc1EG035427 10.0kb upstream 10.0kb upstream 12683 true scaffold_8: 8880948-8893630 Theobroma cacao
Thecc1EG035427 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8883631-8893630 Theobroma cacao
Thecc1EG035427 10.0kb downstream 10.0kb downstream 12683 true scaffold_8: 8870948-8883630 Theobroma cacao
Thecc1EG035427 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8870948-8880947 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822177 5264 Brassicales-Malvales Singleton cluster - no MSA
124351335 5266 SBM View MSA
124253219 5268 Malvidae View MSA
124072794 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain