Gene : Thecc1EG035408 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1397
Name:  ? Thecc1EG035408 Secondary Identifier:  ? PAC:27458706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035408 0.5kb upstream 0.5kb upstream 3577 true scaffold_8: 8792319-8795895 Theobroma cacao
Thecc1EG035408 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8795396-8795895 Theobroma cacao
Thecc1EG035408 0.5kb downstream 0.5kb downstream 3577 true scaffold_8: 8791819-8795395 Theobroma cacao
Thecc1EG035408 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8791819-8792318 Theobroma cacao
Thecc1EG035408 1.0kb upstream 1.0kb upstream 4077 true scaffold_8: 8792319-8796395 Theobroma cacao
Thecc1EG035408 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8795396-8796395 Theobroma cacao
Thecc1EG035408 1.0kb downstream 1.0kb downstream 4077 true scaffold_8: 8791319-8795395 Theobroma cacao
Thecc1EG035408 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8791319-8792318 Theobroma cacao
Thecc1EG035408 2.0kb upstream 2.0kb upstream 5077 true scaffold_8: 8792319-8797395 Theobroma cacao
Thecc1EG035408 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8795396-8797395 Theobroma cacao
Thecc1EG035408 2.0kb downstream 2.0kb downstream 5077 true scaffold_8: 8790319-8795395 Theobroma cacao
Thecc1EG035408 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8790319-8792318 Theobroma cacao
Thecc1EG035408 5.0kb upstream 5.0kb upstream 8077 true scaffold_8: 8792319-8800395 Theobroma cacao
Thecc1EG035408 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8795396-8800395 Theobroma cacao
Thecc1EG035408 5.0kb downstream 5.0kb downstream 8077 true scaffold_8: 8787319-8795395 Theobroma cacao
Thecc1EG035408 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8787319-8792318 Theobroma cacao
Thecc1EG035408 10.0kb upstream 10.0kb upstream 13077 true scaffold_8: 8792319-8805395 Theobroma cacao
Thecc1EG035408 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8795396-8805395 Theobroma cacao
Thecc1EG035408 10.0kb downstream 10.0kb downstream 13077 true scaffold_8: 8782319-8795395 Theobroma cacao
Thecc1EG035408 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8782319-8792318 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841152 5264 Brassicales-Malvales View MSA
124322857 5266 SBM View MSA
124169239 5268 Malvidae View MSA
124071327 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain