Gene : Thecc1EG035303 T. cacao v1.1
Defline:  (1 of 3) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) Genomic Order:  1342
Name:  ? Thecc1EG035303 Secondary Identifier:  ? PAC:27459383
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5046 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035303 0.5kb upstream 0.5kb upstream 6588 true scaffold_8: 7952834-7959421 Theobroma cacao
Thecc1EG035303 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7952834-7953333 Theobroma cacao
Thecc1EG035303 0.5kb downstream 0.5kb downstream 6588 true scaffold_8: 7953334-7959921 Theobroma cacao
Thecc1EG035303 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7959422-7959921 Theobroma cacao
Thecc1EG035303 1.0kb upstream 1.0kb upstream 7088 true scaffold_8: 7952334-7959421 Theobroma cacao
Thecc1EG035303 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7952334-7953333 Theobroma cacao
Thecc1EG035303 1.0kb downstream 1.0kb downstream 7088 true scaffold_8: 7953334-7960421 Theobroma cacao
Thecc1EG035303 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7959422-7960421 Theobroma cacao
Thecc1EG035303 2.0kb upstream 2.0kb upstream 8088 true scaffold_8: 7951334-7959421 Theobroma cacao
Thecc1EG035303 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7951334-7953333 Theobroma cacao
Thecc1EG035303 2.0kb downstream 2.0kb downstream 8088 true scaffold_8: 7953334-7961421 Theobroma cacao
Thecc1EG035303 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7959422-7961421 Theobroma cacao
Thecc1EG035303 5.0kb upstream 5.0kb upstream 11088 true scaffold_8: 7948334-7959421 Theobroma cacao
Thecc1EG035303 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7948334-7953333 Theobroma cacao
Thecc1EG035303 5.0kb downstream 5.0kb downstream 11088 true scaffold_8: 7953334-7964421 Theobroma cacao
Thecc1EG035303 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7959422-7964421 Theobroma cacao
Thecc1EG035303 10.0kb upstream 10.0kb upstream 16088 true scaffold_8: 7943334-7959421 Theobroma cacao
Thecc1EG035303 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7943334-7953333 Theobroma cacao
Thecc1EG035303 10.0kb downstream 10.0kb downstream 16088 true scaffold_8: 7953334-7969421 Theobroma cacao
Thecc1EG035303 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7959422-7969421 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832958 5264 Brassicales-Malvales View MSA
124348231 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain