Gene : Thecc1EG035212 T. cacao v1.1

Defline:  (1 of 1) PTHR11945:SF97 - FLORAL HOMEOTIC PROTEIN PISTILLATA Genomic Order:  1292
Name:  ? Thecc1EG035212 Secondary Identifier:  ? PAC:27458186

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035212 0.5kb upstream 0.5kb upstream 3304 true scaffold_8: 7111739-7115042 Theobroma cacao
Thecc1EG035212 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7111739-7112238 Theobroma cacao
Thecc1EG035212 0.5kb downstream 0.5kb downstream 3304 true scaffold_8: 7112239-7115542 Theobroma cacao
Thecc1EG035212 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7115043-7115542 Theobroma cacao
Thecc1EG035212 1.0kb upstream 1.0kb upstream 3804 true scaffold_8: 7111239-7115042 Theobroma cacao
Thecc1EG035212 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7111239-7112238 Theobroma cacao
Thecc1EG035212 1.0kb downstream 1.0kb downstream 3804 true scaffold_8: 7112239-7116042 Theobroma cacao
Thecc1EG035212 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7115043-7116042 Theobroma cacao
Thecc1EG035212 2.0kb upstream 2.0kb upstream 4804 true scaffold_8: 7110239-7115042 Theobroma cacao
Thecc1EG035212 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7110239-7112238 Theobroma cacao
Thecc1EG035212 2.0kb downstream 2.0kb downstream 4804 true scaffold_8: 7112239-7117042 Theobroma cacao
Thecc1EG035212 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7115043-7117042 Theobroma cacao
Thecc1EG035212 5.0kb upstream 5.0kb upstream 7804 true scaffold_8: 7107239-7115042 Theobroma cacao
Thecc1EG035212 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7107239-7112238 Theobroma cacao
Thecc1EG035212 5.0kb downstream 5.0kb downstream 7804 true scaffold_8: 7112239-7120042 Theobroma cacao
Thecc1EG035212 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7115043-7120042 Theobroma cacao
Thecc1EG035212 10.0kb upstream 10.0kb upstream 12804 true scaffold_8: 7102239-7115042 Theobroma cacao
Thecc1EG035212 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7102239-7112238 Theobroma cacao
Thecc1EG035212 10.0kb downstream 10.0kb downstream 12804 true scaffold_8: 7112239-7125042 Theobroma cacao
Thecc1EG035212 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7115043-7125042 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836617 5264 Brassicales-Malvales View MSA
124350859 5266 SBM View MSA
124245466 5268 Malvidae View MSA
124070458 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain