Gene : Thecc1EG035802 T. cacao v1.1
Defline:  (1 of 3) K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) Genomic Order:  1603
Name:  ? Thecc1EG035802 Secondary Identifier:  ? PAC:27458973
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035802 0.5kb upstream 0.5kb upstream 3415 true scaffold_8: 12580540-12583954 Theobroma cacao
Thecc1EG035802 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12580540-12581039 Theobroma cacao
Thecc1EG035802 0.5kb downstream 0.5kb downstream 3415 true scaffold_8: 12581040-12584454 Theobroma cacao
Thecc1EG035802 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12583955-12584454 Theobroma cacao
Thecc1EG035802 1.0kb upstream 1.0kb upstream 3915 true scaffold_8: 12580040-12583954 Theobroma cacao
Thecc1EG035802 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12580040-12581039 Theobroma cacao
Thecc1EG035802 1.0kb downstream 1.0kb downstream 3915 true scaffold_8: 12581040-12584954 Theobroma cacao
Thecc1EG035802 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12583955-12584954 Theobroma cacao
Thecc1EG035802 2.0kb upstream 2.0kb upstream 4915 true scaffold_8: 12579040-12583954 Theobroma cacao
Thecc1EG035802 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12579040-12581039 Theobroma cacao
Thecc1EG035802 2.0kb downstream 2.0kb downstream 4915 true scaffold_8: 12581040-12585954 Theobroma cacao
Thecc1EG035802 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12583955-12585954 Theobroma cacao
Thecc1EG035802 5.0kb upstream 5.0kb upstream 7915 true scaffold_8: 12576040-12583954 Theobroma cacao
Thecc1EG035802 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12576040-12581039 Theobroma cacao
Thecc1EG035802 5.0kb downstream 5.0kb downstream 7915 true scaffold_8: 12581040-12588954 Theobroma cacao
Thecc1EG035802 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12583955-12588954 Theobroma cacao
Thecc1EG035802 10.0kb upstream 10.0kb upstream 12915 true scaffold_8: 12571040-12583954 Theobroma cacao
Thecc1EG035802 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12571040-12581039 Theobroma cacao
Thecc1EG035802 10.0kb downstream 10.0kb downstream 12915 true scaffold_8: 12581040-12593954 Theobroma cacao
Thecc1EG035802 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12583955-12593954 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828604 5264 Brassicales-Malvales View MSA
124345605 5266 SBM View MSA
124251482 5268 Malvidae View MSA
124068542 5270 Rosid View MSA
123738678 5271 Pentapetalae View MSA
122785697 5272 Eudicot View MSA
122043953 5273 Angiosperm View MSA
121345441 5274 Embryophyte View MSA
123428776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain