Gene : Thecc1EG035725 T. cacao v1.1
Defline:  (1 of 1) PF00385//PF00665//PF09337 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // His(2)-Cys(2) zinc finger (zf-H2C2) Genomic Order:  1580
Name:  ? Thecc1EG035725 Secondary Identifier:  ? PAC:27456902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035725 0.5kb upstream 0.5kb upstream 2129 true scaffold_8: 11695234-11697362 Theobroma cacao
Thecc1EG035725 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11695234-11695733 Theobroma cacao
Thecc1EG035725 0.5kb downstream 0.5kb downstream 2129 true scaffold_8: 11695734-11697862 Theobroma cacao
Thecc1EG035725 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11697363-11697862 Theobroma cacao
Thecc1EG035725 1.0kb upstream 1.0kb upstream 2629 true scaffold_8: 11694734-11697362 Theobroma cacao
Thecc1EG035725 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11694734-11695733 Theobroma cacao
Thecc1EG035725 1.0kb downstream 1.0kb downstream 2629 true scaffold_8: 11695734-11698362 Theobroma cacao
Thecc1EG035725 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11697363-11698362 Theobroma cacao
Thecc1EG035725 2.0kb upstream 2.0kb upstream 3629 true scaffold_8: 11693734-11697362 Theobroma cacao
Thecc1EG035725 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11693734-11695733 Theobroma cacao
Thecc1EG035725 2.0kb downstream 2.0kb downstream 3629 true scaffold_8: 11695734-11699362 Theobroma cacao
Thecc1EG035725 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11697363-11699362 Theobroma cacao
Thecc1EG035725 5.0kb upstream 5.0kb upstream 6629 true scaffold_8: 11690734-11697362 Theobroma cacao
Thecc1EG035725 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11690734-11695733 Theobroma cacao
Thecc1EG035725 5.0kb downstream 5.0kb downstream 6629 true scaffold_8: 11695734-11702362 Theobroma cacao
Thecc1EG035725 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11697363-11702362 Theobroma cacao
Thecc1EG035725 10.0kb upstream 10.0kb upstream 11629 true scaffold_8: 11685734-11697362 Theobroma cacao
Thecc1EG035725 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11685734-11695733 Theobroma cacao
Thecc1EG035725 10.0kb downstream 10.0kb downstream 11629 true scaffold_8: 11695734-11707362 Theobroma cacao
Thecc1EG035725 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11697363-11707362 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823792 5264 Brassicales-Malvales View MSA
124319848 5266 SBM View MSA
124168352 5268 Malvidae View MSA
124038106 5270 Rosid View MSA
123752349 5271 Pentapetalae View MSA
122774503 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain