Gene : Thecc1EG035633 T. cacao v1.1
Defline:  (1 of 1) PTHR12197:SF160 - PROTEIN SET DOMAIN GROUP 41 Genomic Order:  1522
Name:  ? Thecc1EG035633 Secondary Identifier:  ? PAC:27459222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035633 0.5kb upstream 0.5kb upstream 6313 true scaffold_8: 10815030-10821342 Theobroma cacao
Thecc1EG035633 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10815030-10815529 Theobroma cacao
Thecc1EG035633 0.5kb downstream 0.5kb downstream 6313 true scaffold_8: 10815530-10821842 Theobroma cacao
Thecc1EG035633 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10821343-10821842 Theobroma cacao
Thecc1EG035633 1.0kb upstream 1.0kb upstream 6813 true scaffold_8: 10814530-10821342 Theobroma cacao
Thecc1EG035633 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10814530-10815529 Theobroma cacao
Thecc1EG035633 1.0kb downstream 1.0kb downstream 6813 true scaffold_8: 10815530-10822342 Theobroma cacao
Thecc1EG035633 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10821343-10822342 Theobroma cacao
Thecc1EG035633 2.0kb upstream 2.0kb upstream 7813 true scaffold_8: 10813530-10821342 Theobroma cacao
Thecc1EG035633 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10813530-10815529 Theobroma cacao
Thecc1EG035633 2.0kb downstream 2.0kb downstream 7813 true scaffold_8: 10815530-10823342 Theobroma cacao
Thecc1EG035633 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10821343-10823342 Theobroma cacao
Thecc1EG035633 5.0kb upstream 5.0kb upstream 10813 true scaffold_8: 10810530-10821342 Theobroma cacao
Thecc1EG035633 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10810530-10815529 Theobroma cacao
Thecc1EG035633 5.0kb downstream 5.0kb downstream 10813 true scaffold_8: 10815530-10826342 Theobroma cacao
Thecc1EG035633 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10821343-10826342 Theobroma cacao
Thecc1EG035633 10.0kb upstream 10.0kb upstream 15813 true scaffold_8: 10805530-10821342 Theobroma cacao
Thecc1EG035633 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10805530-10815529 Theobroma cacao
Thecc1EG035633 10.0kb downstream 10.0kb downstream 15813 true scaffold_8: 10815530-10831342 Theobroma cacao
Thecc1EG035633 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10821343-10831342 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828046 5264 Brassicales-Malvales View MSA
124343061 5266 SBM View MSA
124241407 5268 Malvidae View MSA
124050457 5270 Rosid View MSA
123748819 5271 Pentapetalae View MSA
122793120 5272 Eudicot View MSA
122044425 5273 Angiosperm View MSA
121310294 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain