Gene : Thecc1EG035631 T. cacao v1.1
Defline:  (1 of 1) 2.7.8.27 - Sphingomyelin synthase / SM synthase Genomic Order:  1520
Name:  ? Thecc1EG035631 Secondary Identifier:  ? PAC:27457000
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY3DJ-11281 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035631 0.5kb upstream 0.5kb upstream 5117 true scaffold_8: 10802877-10807993 Theobroma cacao
Thecc1EG035631 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10802877-10803376 Theobroma cacao
Thecc1EG035631 0.5kb downstream 0.5kb downstream 5117 true scaffold_8: 10803377-10808493 Theobroma cacao
Thecc1EG035631 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10807994-10808493 Theobroma cacao
Thecc1EG035631 1.0kb upstream 1.0kb upstream 5617 true scaffold_8: 10802377-10807993 Theobroma cacao
Thecc1EG035631 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10802377-10803376 Theobroma cacao
Thecc1EG035631 1.0kb downstream 1.0kb downstream 5617 true scaffold_8: 10803377-10808993 Theobroma cacao
Thecc1EG035631 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10807994-10808993 Theobroma cacao
Thecc1EG035631 2.0kb upstream 2.0kb upstream 6617 true scaffold_8: 10801377-10807993 Theobroma cacao
Thecc1EG035631 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10801377-10803376 Theobroma cacao
Thecc1EG035631 2.0kb downstream 2.0kb downstream 6617 true scaffold_8: 10803377-10809993 Theobroma cacao
Thecc1EG035631 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10807994-10809993 Theobroma cacao
Thecc1EG035631 5.0kb upstream 5.0kb upstream 9617 true scaffold_8: 10798377-10807993 Theobroma cacao
Thecc1EG035631 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10798377-10803376 Theobroma cacao
Thecc1EG035631 5.0kb downstream 5.0kb downstream 9617 true scaffold_8: 10803377-10812993 Theobroma cacao
Thecc1EG035631 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10807994-10812993 Theobroma cacao
Thecc1EG035631 10.0kb upstream 10.0kb upstream 14617 true scaffold_8: 10793377-10807993 Theobroma cacao
Thecc1EG035631 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10793377-10803376 Theobroma cacao
Thecc1EG035631 10.0kb downstream 10.0kb downstream 14617 true scaffold_8: 10803377-10817993 Theobroma cacao
Thecc1EG035631 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10807994-10817993 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041514 5273 Angiosperm View MSA
123832928 5264 Brassicales-Malvales View MSA
124346334 5266 SBM View MSA
124245000 5268 Malvidae View MSA
124064312 5270 Rosid View MSA
123737084 5271 Pentapetalae View MSA
122786755 5272 Eudicot View MSA
121345949 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain