Gene : Thecc1EG035621 T. cacao v1.1

Defline:  (1 of 1) PTHR11527:SF169 - ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN Genomic Order:  1512
Name:  ? Thecc1EG035621 Secondary Identifier:  ? PAC:27458043

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035621 0.5kb upstream 0.5kb upstream 4567 true scaffold_8: 10751425-10755991 Theobroma cacao
Thecc1EG035621 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10755492-10755991 Theobroma cacao
Thecc1EG035621 0.5kb downstream 0.5kb downstream 4567 true scaffold_8: 10750925-10755491 Theobroma cacao
Thecc1EG035621 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10750925-10751424 Theobroma cacao
Thecc1EG035621 1.0kb upstream 1.0kb upstream 5067 true scaffold_8: 10751425-10756491 Theobroma cacao
Thecc1EG035621 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10755492-10756491 Theobroma cacao
Thecc1EG035621 1.0kb downstream 1.0kb downstream 5067 true scaffold_8: 10750425-10755491 Theobroma cacao
Thecc1EG035621 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10750425-10751424 Theobroma cacao
Thecc1EG035621 2.0kb upstream 2.0kb upstream 6067 true scaffold_8: 10751425-10757491 Theobroma cacao
Thecc1EG035621 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10755492-10757491 Theobroma cacao
Thecc1EG035621 2.0kb downstream 2.0kb downstream 6067 true scaffold_8: 10749425-10755491 Theobroma cacao
Thecc1EG035621 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10749425-10751424 Theobroma cacao
Thecc1EG035621 5.0kb upstream 5.0kb upstream 9067 true scaffold_8: 10751425-10760491 Theobroma cacao
Thecc1EG035621 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10755492-10760491 Theobroma cacao
Thecc1EG035621 5.0kb downstream 5.0kb downstream 9067 true scaffold_8: 10746425-10755491 Theobroma cacao
Thecc1EG035621 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10746425-10751424 Theobroma cacao
Thecc1EG035621 10.0kb upstream 10.0kb upstream 14067 true scaffold_8: 10751425-10765491 Theobroma cacao
Thecc1EG035621 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10755492-10765491 Theobroma cacao
Thecc1EG035621 10.0kb downstream 10.0kb downstream 14067 true scaffold_8: 10741425-10755491 Theobroma cacao
Thecc1EG035621 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10741425-10751424 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822246 5264 Brassicales-Malvales Singleton cluster - no MSA
124318389 5266 SBM Singleton cluster - no MSA
124167044 5268 Malvidae Singleton cluster - no MSA
123890582 5270 Rosid Singleton cluster - no MSA
123472908 5271 Pentapetalae Singleton cluster - no MSA
122508193 5272 Eudicot Singleton cluster - no MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain