Gene : Thecc1EG035565 T. cacao v1.1
Defline:  (1 of 2) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  1484
Name:  ? Thecc1EG035565 Secondary Identifier:  ? PAC:27457031
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035565 0.5kb upstream 0.5kb upstream 4750 true scaffold_8: 10168204-10172953 Theobroma cacao
Thecc1EG035565 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10168204-10168703 Theobroma cacao
Thecc1EG035565 0.5kb downstream 0.5kb downstream 4750 true scaffold_8: 10168704-10173453 Theobroma cacao
Thecc1EG035565 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10172954-10173453 Theobroma cacao
Thecc1EG035565 1.0kb upstream 1.0kb upstream 5250 true scaffold_8: 10167704-10172953 Theobroma cacao
Thecc1EG035565 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10167704-10168703 Theobroma cacao
Thecc1EG035565 1.0kb downstream 1.0kb downstream 5250 true scaffold_8: 10168704-10173953 Theobroma cacao
Thecc1EG035565 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10172954-10173953 Theobroma cacao
Thecc1EG035565 2.0kb upstream 2.0kb upstream 6250 true scaffold_8: 10166704-10172953 Theobroma cacao
Thecc1EG035565 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10166704-10168703 Theobroma cacao
Thecc1EG035565 2.0kb downstream 2.0kb downstream 6250 true scaffold_8: 10168704-10174953 Theobroma cacao
Thecc1EG035565 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10172954-10174953 Theobroma cacao
Thecc1EG035565 5.0kb upstream 5.0kb upstream 9250 true scaffold_8: 10163704-10172953 Theobroma cacao
Thecc1EG035565 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10163704-10168703 Theobroma cacao
Thecc1EG035565 5.0kb downstream 5.0kb downstream 9250 true scaffold_8: 10168704-10177953 Theobroma cacao
Thecc1EG035565 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10172954-10177953 Theobroma cacao
Thecc1EG035565 10.0kb upstream 10.0kb upstream 14250 true scaffold_8: 10158704-10172953 Theobroma cacao
Thecc1EG035565 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10158704-10168703 Theobroma cacao
Thecc1EG035565 10.0kb downstream 10.0kb downstream 14250 true scaffold_8: 10168704-10182953 Theobroma cacao
Thecc1EG035565 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10172954-10182953 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830221 5264 Brassicales-Malvales View MSA
124350091 5266 SBM View MSA
124247912 5268 Malvidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain