Gene : Thecc1EG036289 T. cacao v1.1
Defline:  (1 of 6) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Genomic Order:  1779
Name:  ? Thecc1EG036289 Secondary Identifier:  ? PAC:27459169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036289 0.5kb upstream 0.5kb upstream 1393 true scaffold_8: 17936048-17937440 Theobroma cacao
Thecc1EG036289 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 17936941-17937440 Theobroma cacao
Thecc1EG036289 0.5kb downstream 0.5kb downstream 1393 true scaffold_8: 17935548-17936940 Theobroma cacao
Thecc1EG036289 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 17935548-17936047 Theobroma cacao
Thecc1EG036289 1.0kb upstream 1.0kb upstream 1893 true scaffold_8: 17936048-17937940 Theobroma cacao
Thecc1EG036289 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 17936941-17937940 Theobroma cacao
Thecc1EG036289 1.0kb downstream 1.0kb downstream 1893 true scaffold_8: 17935048-17936940 Theobroma cacao
Thecc1EG036289 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 17935048-17936047 Theobroma cacao
Thecc1EG036289 2.0kb upstream 2.0kb upstream 2893 true scaffold_8: 17936048-17938940 Theobroma cacao
Thecc1EG036289 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 17936941-17938940 Theobroma cacao
Thecc1EG036289 2.0kb downstream 2.0kb downstream 2893 true scaffold_8: 17934048-17936940 Theobroma cacao
Thecc1EG036289 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 17934048-17936047 Theobroma cacao
Thecc1EG036289 5.0kb upstream 5.0kb upstream 5893 true scaffold_8: 17936048-17941940 Theobroma cacao
Thecc1EG036289 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 17936941-17941940 Theobroma cacao
Thecc1EG036289 5.0kb downstream 5.0kb downstream 5893 true scaffold_8: 17931048-17936940 Theobroma cacao
Thecc1EG036289 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 17931048-17936047 Theobroma cacao
Thecc1EG036289 10.0kb upstream 10.0kb upstream 10893 true scaffold_8: 17936048-17946940 Theobroma cacao
Thecc1EG036289 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 17936941-17946940 Theobroma cacao
Thecc1EG036289 10.0kb downstream 10.0kb downstream 10893 true scaffold_8: 17926048-17936940 Theobroma cacao
Thecc1EG036289 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 17926048-17936047 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826761 5264 Brassicales-Malvales View MSA
124321169 5266 SBM View MSA
124248787 5268 Malvidae View MSA
124072823 5270 Rosid View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain