Gene : Thecc1EG036188 T. cacao v1.1
Defline:  (1 of 22) PF01476 - LysM domain (LysM) Genomic Order:  1717
Name:  ? Thecc1EG036188 Secondary Identifier:  ? PAC:27458382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036188 0.5kb upstream 0.5kb upstream 3690 true scaffold_8: 17109307-17112996 Theobroma cacao
Thecc1EG036188 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 17109307-17109806 Theobroma cacao
Thecc1EG036188 0.5kb downstream 0.5kb downstream 3690 true scaffold_8: 17109807-17113496 Theobroma cacao
Thecc1EG036188 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 17112997-17113496 Theobroma cacao
Thecc1EG036188 1.0kb upstream 1.0kb upstream 4190 true scaffold_8: 17108807-17112996 Theobroma cacao
Thecc1EG036188 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 17108807-17109806 Theobroma cacao
Thecc1EG036188 1.0kb downstream 1.0kb downstream 4190 true scaffold_8: 17109807-17113996 Theobroma cacao
Thecc1EG036188 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 17112997-17113996 Theobroma cacao
Thecc1EG036188 2.0kb upstream 2.0kb upstream 5190 true scaffold_8: 17107807-17112996 Theobroma cacao
Thecc1EG036188 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 17107807-17109806 Theobroma cacao
Thecc1EG036188 2.0kb downstream 2.0kb downstream 5190 true scaffold_8: 17109807-17114996 Theobroma cacao
Thecc1EG036188 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 17112997-17114996 Theobroma cacao
Thecc1EG036188 5.0kb upstream 5.0kb upstream 8190 true scaffold_8: 17104807-17112996 Theobroma cacao
Thecc1EG036188 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 17104807-17109806 Theobroma cacao
Thecc1EG036188 5.0kb downstream 5.0kb downstream 8190 true scaffold_8: 17109807-17117996 Theobroma cacao
Thecc1EG036188 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 17112997-17117996 Theobroma cacao
Thecc1EG036188 10.0kb upstream 10.0kb upstream 13190 true scaffold_8: 17099807-17112996 Theobroma cacao
Thecc1EG036188 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 17099807-17109806 Theobroma cacao
Thecc1EG036188 10.0kb downstream 10.0kb downstream 13190 true scaffold_8: 17109807-17122996 Theobroma cacao
Thecc1EG036188 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 17112997-17122996 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830513 5264 Brassicales-Malvales View MSA
124350432 5266 SBM View MSA
124237634 5268 Malvidae View MSA
124069150 5270 Rosid View MSA
123739360 5271 Pentapetalae View MSA
122790807 5272 Eudicot View MSA
122048878 5273 Angiosperm View MSA
121349686 5274 Embryophyte View MSA
123381401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain