Gene : Thecc1EG036027 T. cacao v1.1

Defline:  (1 of 1) PTHR11214//PTHR11214:SF125 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED Genomic Order:  1655
Name:  ? Thecc1EG036027 Secondary Identifier:  ? PAC:27458578

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036027 0.5kb upstream 0.5kb upstream 4870 true scaffold_8: 15324176-15329045 Theobroma cacao
Thecc1EG036027 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 15324176-15324675 Theobroma cacao
Thecc1EG036027 0.5kb downstream 0.5kb downstream 4870 true scaffold_8: 15324676-15329545 Theobroma cacao
Thecc1EG036027 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 15329046-15329545 Theobroma cacao
Thecc1EG036027 1.0kb upstream 1.0kb upstream 5370 true scaffold_8: 15323676-15329045 Theobroma cacao
Thecc1EG036027 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 15323676-15324675 Theobroma cacao
Thecc1EG036027 1.0kb downstream 1.0kb downstream 5370 true scaffold_8: 15324676-15330045 Theobroma cacao
Thecc1EG036027 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 15329046-15330045 Theobroma cacao
Thecc1EG036027 2.0kb upstream 2.0kb upstream 6370 true scaffold_8: 15322676-15329045 Theobroma cacao
Thecc1EG036027 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 15322676-15324675 Theobroma cacao
Thecc1EG036027 2.0kb downstream 2.0kb downstream 6370 true scaffold_8: 15324676-15331045 Theobroma cacao
Thecc1EG036027 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 15329046-15331045 Theobroma cacao
Thecc1EG036027 5.0kb upstream 5.0kb upstream 9370 true scaffold_8: 15319676-15329045 Theobroma cacao
Thecc1EG036027 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 15319676-15324675 Theobroma cacao
Thecc1EG036027 5.0kb downstream 5.0kb downstream 9370 true scaffold_8: 15324676-15334045 Theobroma cacao
Thecc1EG036027 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 15329046-15334045 Theobroma cacao
Thecc1EG036027 10.0kb upstream 10.0kb upstream 14370 true scaffold_8: 15314676-15329045 Theobroma cacao
Thecc1EG036027 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 15314676-15324675 Theobroma cacao
Thecc1EG036027 10.0kb downstream 10.0kb downstream 14370 true scaffold_8: 15324676-15339045 Theobroma cacao
Thecc1EG036027 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 15329046-15339045 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830616 5264 Brassicales-Malvales View MSA
124344180 5266 SBM View MSA
124250344 5268 Malvidae View MSA
124066955 5270 Rosid View MSA
123739966 5271 Pentapetalae View MSA
122785609 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain