Gene : Thecc1EG036493 T. cacao v1.1

Defline:  (1 of 4) PTHR11654//PTHR11654:SF116 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1917
Name:  ? Thecc1EG036493 Secondary Identifier:  ? PAC:27457783

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036493 0.5kb upstream 0.5kb upstream 36752 true scaffold_8: 19432497-19469248 Theobroma cacao
Thecc1EG036493 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 19432497-19432996 Theobroma cacao
Thecc1EG036493 0.5kb downstream 0.5kb downstream 36752 true scaffold_8: 19432997-19469748 Theobroma cacao
Thecc1EG036493 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 19469249-19469748 Theobroma cacao
Thecc1EG036493 1.0kb upstream 1.0kb upstream 37252 true scaffold_8: 19431997-19469248 Theobroma cacao
Thecc1EG036493 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 19431997-19432996 Theobroma cacao
Thecc1EG036493 1.0kb downstream 1.0kb downstream 37252 true scaffold_8: 19432997-19470248 Theobroma cacao
Thecc1EG036493 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 19469249-19470248 Theobroma cacao
Thecc1EG036493 2.0kb upstream 2.0kb upstream 38252 true scaffold_8: 19430997-19469248 Theobroma cacao
Thecc1EG036493 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 19430997-19432996 Theobroma cacao
Thecc1EG036493 2.0kb downstream 2.0kb downstream 38252 true scaffold_8: 19432997-19471248 Theobroma cacao
Thecc1EG036493 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 19469249-19471248 Theobroma cacao
Thecc1EG036493 5.0kb upstream 5.0kb upstream 41252 true scaffold_8: 19427997-19469248 Theobroma cacao
Thecc1EG036493 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 19427997-19432996 Theobroma cacao
Thecc1EG036493 5.0kb downstream 5.0kb downstream 41252 true scaffold_8: 19432997-19474248 Theobroma cacao
Thecc1EG036493 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 19469249-19474248 Theobroma cacao
Thecc1EG036493 10.0kb upstream 10.0kb upstream 46252 true scaffold_8: 19422997-19469248 Theobroma cacao
Thecc1EG036493 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 19422997-19432996 Theobroma cacao
Thecc1EG036493 10.0kb downstream 10.0kb downstream 46252 true scaffold_8: 19432997-19479248 Theobroma cacao
Thecc1EG036493 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 19469249-19479248 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837772 5264 Brassicales-Malvales View MSA
124349653 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain