Gene : Thecc1EG036484 T. cacao v1.1
Defline:  (1 of 1) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Genomic Order:  1912
Name:  ? Thecc1EG036484 Secondary Identifier:  ? PAC:27459401
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036484 0.5kb upstream 0.5kb upstream 5446 true scaffold_8: 19401771-19407216 Theobroma cacao
Thecc1EG036484 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 19406717-19407216 Theobroma cacao
Thecc1EG036484 0.5kb downstream 0.5kb downstream 5446 true scaffold_8: 19401271-19406716 Theobroma cacao
Thecc1EG036484 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 19401271-19401770 Theobroma cacao
Thecc1EG036484 1.0kb upstream 1.0kb upstream 5946 true scaffold_8: 19401771-19407716 Theobroma cacao
Thecc1EG036484 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 19406717-19407716 Theobroma cacao
Thecc1EG036484 1.0kb downstream 1.0kb downstream 5946 true scaffold_8: 19400771-19406716 Theobroma cacao
Thecc1EG036484 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 19400771-19401770 Theobroma cacao
Thecc1EG036484 2.0kb upstream 2.0kb upstream 6946 true scaffold_8: 19401771-19408716 Theobroma cacao
Thecc1EG036484 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 19406717-19408716 Theobroma cacao
Thecc1EG036484 2.0kb downstream 2.0kb downstream 6946 true scaffold_8: 19399771-19406716 Theobroma cacao
Thecc1EG036484 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 19399771-19401770 Theobroma cacao
Thecc1EG036484 5.0kb upstream 5.0kb upstream 9946 true scaffold_8: 19401771-19411716 Theobroma cacao
Thecc1EG036484 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 19406717-19411716 Theobroma cacao
Thecc1EG036484 5.0kb downstream 5.0kb downstream 9946 true scaffold_8: 19396771-19406716 Theobroma cacao
Thecc1EG036484 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 19396771-19401770 Theobroma cacao
Thecc1EG036484 10.0kb upstream 10.0kb upstream 14946 true scaffold_8: 19401771-19416716 Theobroma cacao
Thecc1EG036484 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 19406717-19416716 Theobroma cacao
Thecc1EG036484 10.0kb downstream 10.0kb downstream 14946 true scaffold_8: 19391771-19406716 Theobroma cacao
Thecc1EG036484 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 19391771-19401770 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834418 5264 Brassicales-Malvales View MSA
124343262 5266 SBM View MSA
124238615 5268 Malvidae View MSA
124073706 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain