Gene : Thecc1EG036467 T. cacao v1.1

Defline:  (1 of 1) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1901
Name:  ? Thecc1EG036467 Secondary Identifier:  ? PAC:27458250

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036467 0.5kb upstream 0.5kb upstream 10772 true scaffold_8: 19283492-19294263 Theobroma cacao
Thecc1EG036467 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 19293764-19294263 Theobroma cacao
Thecc1EG036467 0.5kb downstream 0.5kb downstream 10772 true scaffold_8: 19282992-19293763 Theobroma cacao
Thecc1EG036467 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 19282992-19283491 Theobroma cacao
Thecc1EG036467 1.0kb upstream 1.0kb upstream 11272 true scaffold_8: 19283492-19294763 Theobroma cacao
Thecc1EG036467 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 19293764-19294763 Theobroma cacao
Thecc1EG036467 1.0kb downstream 1.0kb downstream 11272 true scaffold_8: 19282492-19293763 Theobroma cacao
Thecc1EG036467 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 19282492-19283491 Theobroma cacao
Thecc1EG036467 2.0kb upstream 2.0kb upstream 12272 true scaffold_8: 19283492-19295763 Theobroma cacao
Thecc1EG036467 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 19293764-19295763 Theobroma cacao
Thecc1EG036467 2.0kb downstream 2.0kb downstream 12272 true scaffold_8: 19281492-19293763 Theobroma cacao
Thecc1EG036467 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 19281492-19283491 Theobroma cacao
Thecc1EG036467 5.0kb upstream 5.0kb upstream 15272 true scaffold_8: 19283492-19298763 Theobroma cacao
Thecc1EG036467 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 19293764-19298763 Theobroma cacao
Thecc1EG036467 5.0kb downstream 5.0kb downstream 15272 true scaffold_8: 19278492-19293763 Theobroma cacao
Thecc1EG036467 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 19278492-19283491 Theobroma cacao
Thecc1EG036467 10.0kb upstream 10.0kb upstream 20272 true scaffold_8: 19283492-19303763 Theobroma cacao
Thecc1EG036467 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 19293764-19303763 Theobroma cacao
Thecc1EG036467 10.0kb downstream 10.0kb downstream 20272 true scaffold_8: 19273492-19293763 Theobroma cacao
Thecc1EG036467 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 19273492-19283491 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
123830217 5264 Brassicales-Malvales View MSA
124341906 5266 SBM View MSA
124241734 5268 Malvidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain