Gene : Thecc1EG036393 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1856
Name:  ? Thecc1EG036393 Secondary Identifier:  ? PAC:27458194
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036393 0.5kb upstream 0.5kb upstream 3392 true scaffold_8: 18653455-18656846 Theobroma cacao
Thecc1EG036393 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 18653455-18653954 Theobroma cacao
Thecc1EG036393 0.5kb downstream 0.5kb downstream 3392 true scaffold_8: 18653955-18657346 Theobroma cacao
Thecc1EG036393 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 18656847-18657346 Theobroma cacao
Thecc1EG036393 1.0kb upstream 1.0kb upstream 3892 true scaffold_8: 18652955-18656846 Theobroma cacao
Thecc1EG036393 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 18652955-18653954 Theobroma cacao
Thecc1EG036393 1.0kb downstream 1.0kb downstream 3892 true scaffold_8: 18653955-18657846 Theobroma cacao
Thecc1EG036393 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 18656847-18657846 Theobroma cacao
Thecc1EG036393 2.0kb upstream 2.0kb upstream 4892 true scaffold_8: 18651955-18656846 Theobroma cacao
Thecc1EG036393 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 18651955-18653954 Theobroma cacao
Thecc1EG036393 2.0kb downstream 2.0kb downstream 4892 true scaffold_8: 18653955-18658846 Theobroma cacao
Thecc1EG036393 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 18656847-18658846 Theobroma cacao
Thecc1EG036393 5.0kb upstream 5.0kb upstream 7892 true scaffold_8: 18648955-18656846 Theobroma cacao
Thecc1EG036393 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 18648955-18653954 Theobroma cacao
Thecc1EG036393 5.0kb downstream 5.0kb downstream 7892 true scaffold_8: 18653955-18661846 Theobroma cacao
Thecc1EG036393 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 18656847-18661846 Theobroma cacao
Thecc1EG036393 10.0kb upstream 10.0kb upstream 12892 true scaffold_8: 18643955-18656846 Theobroma cacao
Thecc1EG036393 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 18643955-18653954 Theobroma cacao
Thecc1EG036393 10.0kb downstream 10.0kb downstream 12892 true scaffold_8: 18653955-18666846 Theobroma cacao
Thecc1EG036393 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 18656847-18666846 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827653 5264 Brassicales-Malvales View MSA
124343678 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain