Gene : Thecc1EG036333 T. cacao v1.1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF61 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1812
Name:  ? Thecc1EG036333 Secondary Identifier:  ? PAC:27457268
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5173 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PYRUVDEHYD-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036333 0.5kb upstream 0.5kb upstream 4855 true scaffold_8: 18184690-18189544 Theobroma cacao
Thecc1EG036333 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 18184690-18185189 Theobroma cacao
Thecc1EG036333 0.5kb downstream 0.5kb downstream 4855 true scaffold_8: 18185190-18190044 Theobroma cacao
Thecc1EG036333 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 18189545-18190044 Theobroma cacao
Thecc1EG036333 1.0kb upstream 1.0kb upstream 5355 true scaffold_8: 18184190-18189544 Theobroma cacao
Thecc1EG036333 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 18184190-18185189 Theobroma cacao
Thecc1EG036333 1.0kb downstream 1.0kb downstream 5355 true scaffold_8: 18185190-18190544 Theobroma cacao
Thecc1EG036333 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 18189545-18190544 Theobroma cacao
Thecc1EG036333 2.0kb upstream 2.0kb upstream 6355 true scaffold_8: 18183190-18189544 Theobroma cacao
Thecc1EG036333 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 18183190-18185189 Theobroma cacao
Thecc1EG036333 2.0kb downstream 2.0kb downstream 6355 true scaffold_8: 18185190-18191544 Theobroma cacao
Thecc1EG036333 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 18189545-18191544 Theobroma cacao
Thecc1EG036333 5.0kb upstream 5.0kb upstream 9355 true scaffold_8: 18180190-18189544 Theobroma cacao
Thecc1EG036333 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 18180190-18185189 Theobroma cacao
Thecc1EG036333 5.0kb downstream 5.0kb downstream 9355 true scaffold_8: 18185190-18194544 Theobroma cacao
Thecc1EG036333 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 18189545-18194544 Theobroma cacao
Thecc1EG036333 10.0kb upstream 10.0kb upstream 14355 true scaffold_8: 18175190-18189544 Theobroma cacao
Thecc1EG036333 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 18175190-18185189 Theobroma cacao
Thecc1EG036333 10.0kb downstream 10.0kb downstream 14355 true scaffold_8: 18185190-18199544 Theobroma cacao
Thecc1EG036333 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 18189545-18199544 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833384 5264 Brassicales-Malvales View MSA
124343361 5266 SBM View MSA
124252180 5268 Malvidae View MSA
124064326 5270 Rosid View MSA
123740980 5271 Pentapetalae View MSA
122792137 5272 Eudicot View MSA
122047464 5273 Angiosperm View MSA
121347035 5274 Embryophyte View MSA
123424416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain