Gene : Thecc1EG036763 T. cacao v1.1
Defline:  (1 of 1) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48) Genomic Order:  20
Name:  ? Thecc1EG036763 Secondary Identifier:  ? PAC:27429199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036763 0.5kb upstream 0.5kb upstream 11045 true scaffold_9: 157312-168356 Theobroma cacao
Thecc1EG036763 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 167857-168356 Theobroma cacao
Thecc1EG036763 0.5kb downstream 0.5kb downstream 11045 true scaffold_9: 156812-167856 Theobroma cacao
Thecc1EG036763 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 156812-157311 Theobroma cacao
Thecc1EG036763 1.0kb upstream 1.0kb upstream 11545 true scaffold_9: 157312-168856 Theobroma cacao
Thecc1EG036763 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 167857-168856 Theobroma cacao
Thecc1EG036763 1.0kb downstream 1.0kb downstream 11545 true scaffold_9: 156312-167856 Theobroma cacao
Thecc1EG036763 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 156312-157311 Theobroma cacao
Thecc1EG036763 2.0kb upstream 2.0kb upstream 12545 true scaffold_9: 157312-169856 Theobroma cacao
Thecc1EG036763 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 167857-169856 Theobroma cacao
Thecc1EG036763 2.0kb downstream 2.0kb downstream 12545 true scaffold_9: 155312-167856 Theobroma cacao
Thecc1EG036763 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 155312-157311 Theobroma cacao
Thecc1EG036763 5.0kb upstream 5.0kb upstream 15545 true scaffold_9: 157312-172856 Theobroma cacao
Thecc1EG036763 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 167857-172856 Theobroma cacao
Thecc1EG036763 5.0kb downstream 5.0kb downstream 15545 true scaffold_9: 152312-167856 Theobroma cacao
Thecc1EG036763 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 152312-157311 Theobroma cacao
Thecc1EG036763 10.0kb upstream 10.0kb upstream 20545 true scaffold_9: 157312-177856 Theobroma cacao
Thecc1EG036763 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 167857-177856 Theobroma cacao
Thecc1EG036763 10.0kb downstream 10.0kb downstream 20545 true scaffold_9: 147312-167856 Theobroma cacao
Thecc1EG036763 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 147312-157311 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831046 5264 Brassicales-Malvales View MSA
124342030 5266 SBM View MSA
124243585 5268 Malvidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain